dbCAN Logo

Cluster: HRGMv2_1832_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1832_44 HRGMv2_1832_44_13 13100 14104 - GH73
TF HRGMv2_1832_44 HRGMv2_1832_44_14 14289 15404 + LacI
TC HRGMv2_1832_44 HRGMv2_1832_44_15 16056 17336 - 2.A.56.1.4
pfam HRGMv2_1832_44 HRGMv2_1832_44_16 17347 17850 - DctQ
TC HRGMv2_1832_44 HRGMv2_1832_44_17 17912 18907 - 2.A.56.1.8
pfam HRGMv2_1832_44 HRGMv2_1832_44_18 18960 19883 - Transket_pyr | Transketolase_C | Transketolase_C_1
pfam HRGMv2_1832_44 HRGMv2_1832_44_19 19883 20707 - Transketolase_N | E1_dh | DXP_synthase_N
TC HRGMv2_1832_44 HRGMv2_1832_44_20 21261 21935 + 3.A.23.1.1
Gene ID: HRGMv2_1832_44_13
Type: CAZyme
Location: 13100 - 14104 (-)
Gene ID: HRGMv2_1832_44_14
Type: TF
Location: 14289 - 15404 (+)
Gene ID: HRGMv2_1832_44_15
Type: TC
Location: 16056 - 17336 (-)
Gene ID: HRGMv2_1832_44_16
Type: pfam
Location: 17347 - 17850 (-)
Gene ID: HRGMv2_1832_44_17
Type: TC
Location: 17912 - 18907 (-)
Gene ID: HRGMv2_1832_44_18
Type: pfam
Location: 18960 - 19883 (-)
Gene ID: HRGMv2_1832_44_19
Type: pfam
Location: 19883 - 20707 (-)
Gene ID: HRGMv2_1832_44_20
Type: TC
Location: 21261 - 21935 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List