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Cluster: HRGMv2_1832_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1832_41 HRGMv2_1832_41_2 775 3408 - 4.D.3.1.6
CAZyme HRGMv2_1832_41 HRGMv2_1832_41_3 3405 5552 - GT2
STP HRGMv2_1832_41 HRGMv2_1832_41_4 5549 6373 - CbiA
NULL(UNKNOWN) HRGMv2_1832_41 HRGMv2_1832_41_5 6364 7659 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1832_41 HRGMv2_1832_41_6 8133 10178 - GT51
TC HRGMv2_1832_41 HRGMv2_1832_41_7 10210 11280 + 9.A.23.1.1
pfam HRGMv2_1832_41 HRGMv2_1832_41_8 11593 12198 + rve_2
peptidase HRGMv2_1832_41 HRGMv2_1832_41_9 12427 17022 - I39.UPW
TC HRGMv2_1832_41 HRGMv2_1832_41_10 17139 17876 - 2.A.64.1.1
Gene ID: HRGMv2_1832_41_2
Type: TC
Location: 775 - 3408 (-)
Gene ID: HRGMv2_1832_41_3
Type: CAZyme
Location: 3405 - 5552 (-)
Gene ID: HRGMv2_1832_41_4
Type: STP
Location: 5549 - 6373 (-)
Gene ID: HRGMv2_1832_41_5
Type:
Location: 6364 - 7659 (-)
Gene ID: HRGMv2_1832_41_6
Type: CAZyme
Location: 8133 - 10178 (-)
Gene ID: HRGMv2_1832_41_7
Type: TC
Location: 10210 - 11280 (+)
Gene ID: HRGMv2_1832_41_8
Type: pfam
Location: 11593 - 12198 (+)
Gene ID: HRGMv2_1832_41_9
Type: peptidase
Location: 12427 - 17022 (-)
Gene ID: HRGMv2_1832_41_10
Type: TC
Location: 17139 - 17876 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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