Cluster: HRGMv2_1826_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1826
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1826_14 | HRGMv2_1826_14_18 | 26423 | 27067 | + | 2.A.123.4.1 |
| NULL(UNKNOWN) | HRGMv2_1826_14 | HRGMv2_1826_14_19 | 27481 | 30090 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_1826_14 | HRGMv2_1826_14_20 | 30373 | 31491 | - | 0039939 |
| TC | HRGMv2_1826_14 | HRGMv2_1826_14_21 | 31576 | 32853 | - | 2.A.1.60.3 |
| CAZyme | HRGMv2_1826_14 | HRGMv2_1826_14_22 | 32981 | 35872 | - | GT51 |
Gene ID: HRGMv2_1826_14_18
Type: TC
Location: 26423 - 27067 (+)
Type: TC
Location: 26423 - 27067 (+)
Gene ID: HRGMv2_1826_14_19
Type:
Location: 27481 - 30090 (+)
Type:
Location: 27481 - 30090 (+)
Gene ID: HRGMv2_1826_14_20
Type: TF
Location: 30373 - 31491 (-)
Type: TF
Location: 30373 - 31491 (-)
Gene ID: HRGMv2_1826_14_21
Type: TC
Location: 31576 - 32853 (-)
Type: TC
Location: 31576 - 32853 (-)
Gene ID: HRGMv2_1826_14_22
Type: CAZyme
Location: 32981 - 35872 (-)
Type: CAZyme
Location: 32981 - 35872 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Succinivibrionaceae
Genus
Anaerobiospirillum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.