Cluster: HRGMv2_1826_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1826
- CGC Family ID: CGCFAM_00157
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1826_62 | HRGMv2_1826_62_5 | 7965 | 10643 | - | GH31_2 |
| TC | HRGMv2_1826_62 | HRGMv2_1826_62_6 | 11109 | 12410 | - | 2.A.56.1.5 |
| TC | HRGMv2_1826_62 | HRGMv2_1826_62_7 | 12410 | 12931 | - | 2.A.56.1.6 |
| TC | HRGMv2_1826_62 | HRGMv2_1826_62_8 | 12945 | 14012 | - | 2.A.56.1.2 |
| CAZyme | HRGMv2_1826_62 | HRGMv2_1826_62_9 | 14408 | 16912 | - | GH31_2 |
Gene ID: HRGMv2_1826_62_5
Type: CAZyme
Location: 7965 - 10643 (-)
Type: CAZyme
Location: 7965 - 10643 (-)
Gene ID: HRGMv2_1826_62_6
Type: TC
Location: 11109 - 12410 (-)
Type: TC
Location: 11109 - 12410 (-)
Gene ID: HRGMv2_1826_62_7
Type: TC
Location: 12410 - 12931 (-)
Type: TC
Location: 12410 - 12931 (-)
Gene ID: HRGMv2_1826_62_8
Type: TC
Location: 12945 - 14012 (-)
Type: TC
Location: 12945 - 14012 (-)
Gene ID: HRGMv2_1826_62_9
Type: CAZyme
Location: 14408 - 16912 (-)
Type: CAZyme
Location: 14408 - 16912 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Succinivibrionaceae
Genus
Anaerobiospirillum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.