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Cluster: HRGMv2_1821_CGC53

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1821_74 HRGMv2_1821_74_1 3 1841 + 9.B.34.1.2
TF HRGMv2_1821_74 HRGMv2_1821_74_2 1868 2932 - LacI
TC HRGMv2_1821_74 HRGMv2_1821_74_3 3155 4465 + 2.A.1.14.2
CAZyme HRGMv2_1821_74 HRGMv2_1821_74_4 4476 6839 + GH31_2
pfam HRGMv2_1821_74 HRGMv2_1821_74_5 6900 7406 - Ferritin
TC HRGMv2_1821_74 HRGMv2_1821_74_6 7896 8564 + 9.A.5.4.2
TC HRGMv2_1821_74 HRGMv2_1821_74_7 8554 9027 + 9.B.156.1.3
Gene ID: HRGMv2_1821_74_1
Type: TC
Location: 3 - 1841 (+)
Gene ID: HRGMv2_1821_74_2
Type: TF
Location: 1868 - 2932 (-)
Gene ID: HRGMv2_1821_74_3
Type: TC
Location: 3155 - 4465 (+)
Gene ID: HRGMv2_1821_74_4
Type: CAZyme
Location: 4476 - 6839 (+)
Gene ID: HRGMv2_1821_74_5
Type: pfam
Location: 6900 - 7406 (-)
Gene ID: HRGMv2_1821_74_6
Type: TC
Location: 7896 - 8564 (+)
Gene ID: HRGMv2_1821_74_7
Type: TC
Location: 8554 - 9027 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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