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Cluster: HRGMv2_1821_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1821_1 HRGMv2_1821_1_216 243450 243797 - 8.A.2.1.3
CAZyme HRGMv2_1821_1 HRGMv2_1821_1_217 243980 245575 + AA1
pfam HRGMv2_1821_1 HRGMv2_1821_1_218 245576 246859 - Cys_Met_Meta_PP
STP HRGMv2_1821_1 HRGMv2_1821_1_219 247095 247631 + Pribosyltran
TC HRGMv2_1821_1 HRGMv2_1821_1_220 247712 248443 - 2.A.53.3.8
TC HRGMv2_1821_1 HRGMv2_1821_1_221 248477 249406 + 3.A.1.105.17
TC HRGMv2_1821_1 HRGMv2_1821_1_222 249403 250173 + 3.A.1.105.17
Gene ID: HRGMv2_1821_1_216
Type: TC
Location: 243450 - 243797 (-)
Gene ID: HRGMv2_1821_1_217
Type: CAZyme
Location: 243980 - 245575 (+)
Gene ID: HRGMv2_1821_1_218
Type: pfam
Location: 245576 - 246859 (-)
Gene ID: HRGMv2_1821_1_219
Type: STP
Location: 247095 - 247631 (+)
Gene ID: HRGMv2_1821_1_220
Type: TC
Location: 247712 - 248443 (-)
Gene ID: HRGMv2_1821_1_221
Type: TC
Location: 248477 - 249406 (+)
Gene ID: HRGMv2_1821_1_222
Type: TC
Location: 249403 - 250173 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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