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Cluster: HRGMv2_1821_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1821_24 HRGMv2_1821_24_53 59693 60913 - GT81
pfam HRGMv2_1821_24 HRGMv2_1821_24_54 60944 61735 - S6PP | Hydrolase_3
pfam HRGMv2_1821_24 HRGMv2_1821_24_55 62089 62322 - DUF2525
TC HRGMv2_1821_24 HRGMv2_1821_24_56 62641 62799 + 9.B.12.2.1
pfam HRGMv2_1821_24 HRGMv2_1821_24_57 62862 63056 + DSRB
TC HRGMv2_1821_24 HRGMv2_1821_24_58 63165 64871 - 1.B.52.2.1
TF HRGMv2_1821_24 HRGMv2_1821_24_59 65013 65648 - GerE
TC HRGMv2_1821_24 HRGMv2_1821_24_60 66276 67061 - 3.A.6.2.1
TC HRGMv2_1821_24 HRGMv2_1821_24_61 67061 67330 - 3.A.6.2.1
TC HRGMv2_1821_24 HRGMv2_1821_24_62 67357 68091 - 3.A.6.2.1
TC HRGMv2_1821_24 HRGMv2_1821_24_63 68088 68486 - 3.A.6.2.1
TC HRGMv2_1821_24 HRGMv2_1821_24_64 68498 68905 - 3.A.6.2.1
Gene ID: HRGMv2_1821_24_53
Type: CAZyme
Location: 59693 - 60913 (-)
Gene ID: HRGMv2_1821_24_54
Type: pfam
Location: 60944 - 61735 (-)
Gene ID: HRGMv2_1821_24_55
Type: pfam
Location: 62089 - 62322 (-)
Gene ID: HRGMv2_1821_24_56
Type: TC
Location: 62641 - 62799 (+)
Gene ID: HRGMv2_1821_24_57
Type: pfam
Location: 62862 - 63056 (+)
Gene ID: HRGMv2_1821_24_58
Type: TC
Location: 63165 - 64871 (-)
Gene ID: HRGMv2_1821_24_59
Type: TF
Location: 65013 - 65648 (-)
Gene ID: HRGMv2_1821_24_60
Type: TC
Location: 66276 - 67061 (-)
Gene ID: HRGMv2_1821_24_61
Type: TC
Location: 67061 - 67330 (-)
Gene ID: HRGMv2_1821_24_62
Type: TC
Location: 67357 - 68091 (-)
Gene ID: HRGMv2_1821_24_63
Type: TC
Location: 68088 - 68486 (-)
Gene ID: HRGMv2_1821_24_64
Type: TC
Location: 68498 - 68905 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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