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Cluster: HRGMv2_1821_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1821_23 HRGMv2_1821_23_38 35363 36403 + GH3
peptidase HRGMv2_1821_23 HRGMv2_1821_23_39 36444 36986 + S09.UNW
STP HRGMv2_1821_23 HRGMv2_1821_23_40 37196 38503 + Pyr_redox_2
TC HRGMv2_1821_23 HRGMv2_1821_23_41 39094 40812 + 1.B.20.1.5
TC HRGMv2_1821_23 HRGMv2_1821_23_42 40852 45876 + 1.C.75.1.2
TC HRGMv2_1821_23 HRGMv2_1821_23_43 45997 51240 + 1.C.75.1.2
NULL(UNKNOWN) HRGMv2_1821_23 HRGMv2_1821_23_44 51237 51575 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1821_23 HRGMv2_1821_23_45 51905 53191 + 1.C.75.1.2
NULL(UNKNOWN) HRGMv2_1821_23 HRGMv2_1821_23_46 53188 53673 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1821_23 HRGMv2_1821_23_47 53716 53931 - SymE_toxin
TC HRGMv2_1821_23 HRGMv2_1821_23_48 55068 55631 + 1.B.6.2.2
Gene ID: HRGMv2_1821_23_38
Type: CAZyme
Location: 35363 - 36403 (+)
Gene ID: HRGMv2_1821_23_39
Type: peptidase
Location: 36444 - 36986 (+)
Gene ID: HRGMv2_1821_23_40
Type: STP
Location: 37196 - 38503 (+)
Gene ID: HRGMv2_1821_23_41
Type: TC
Location: 39094 - 40812 (+)
Gene ID: HRGMv2_1821_23_42
Type: TC
Location: 40852 - 45876 (+)
Gene ID: HRGMv2_1821_23_43
Type: TC
Location: 45997 - 51240 (+)
Gene ID: HRGMv2_1821_23_44
Type:
Location: 51237 - 51575 (+)
Gene ID: HRGMv2_1821_23_45
Type: TC
Location: 51905 - 53191 (+)
Gene ID: HRGMv2_1821_23_46
Type:
Location: 53188 - 53673 (+)
Gene ID: HRGMv2_1821_23_47
Type: pfam
Location: 53716 - 53931 (-)
Gene ID: HRGMv2_1821_23_48
Type: TC
Location: 55068 - 55631 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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