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Cluster: HRGMv2_1821_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1821_15 HRGMv2_1821_15_83 81661 84108 - GT35
CAZyme HRGMv2_1821_15 HRGMv2_1821_15_84 84128 85561 - GT5
pfam HRGMv2_1821_15 HRGMv2_1821_15_85 85625 86917 - NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_1821_15 HRGMv2_1821_15_86 86928 88910 - CBM48 | GH13_11
CAZyme HRGMv2_1821_15 HRGMv2_1821_15_87 88907 91090 - CBM48 | GH13_9
pfam HRGMv2_1821_15 HRGMv2_1821_15_88 91451 92560 - Semialdhyde_dh | Semialdhyde_dhC
TC HRGMv2_1821_15 HRGMv2_1821_15_89 92778 93371 + 2.A.95.1.5
TC HRGMv2_1821_15 HRGMv2_1821_15_90 93422 94762 - 2.A.8.1.8
Gene ID: HRGMv2_1821_15_83
Type: CAZyme
Location: 81661 - 84108 (-)
Gene ID: HRGMv2_1821_15_84
Type: CAZyme
Location: 84128 - 85561 (-)
Gene ID: HRGMv2_1821_15_85
Type: pfam
Location: 85625 - 86917 (-)
Gene ID: HRGMv2_1821_15_86
Type: CAZyme
Location: 86928 - 88910 (-)
Gene ID: HRGMv2_1821_15_87
Type: CAZyme
Location: 88907 - 91090 (-)
Gene ID: HRGMv2_1821_15_88
Type: pfam
Location: 91451 - 92560 (-)
Gene ID: HRGMv2_1821_15_89
Type: TC
Location: 92778 - 93371 (+)
Gene ID: HRGMv2_1821_15_90
Type: TC
Location: 93422 - 94762 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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