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Cluster: HRGMv2_1821_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1821_12 HRGMv2_1821_12_20 24491 27094 + GT2
TC HRGMv2_1821_12 HRGMv2_1821_12_21 27099 29387 + 4.D.3.1.6
TC HRGMv2_1821_12 HRGMv2_1821_12_22 29380 32847 + 1.B.55.3.1
STP HRGMv2_1821_12 HRGMv2_1821_12_23 32964 34970 + EAL | GGDEF
TC HRGMv2_1821_12 HRGMv2_1821_12_24 35196 36485 + 2.A.23.1.7
peptidase HRGMv2_1821_12 HRGMv2_1821_12_25 36732 38222 + M16.UNW
peptidase HRGMv2_1821_12 HRGMv2_1821_12_26 38225 39097 - S09.UPW
TC HRGMv2_1821_12 HRGMv2_1821_12_27 39590 41347 + 3.A.1.106.1
STP HRGMv2_1821_12 HRGMv2_1821_12_28 41549 42583 - PfkB
TC HRGMv2_1821_12 HRGMv2_1821_12_29 42766 44826 + 9.B.121.1.1
Gene ID: HRGMv2_1821_12_20
Type: CAZyme
Location: 24491 - 27094 (+)
Gene ID: HRGMv2_1821_12_21
Type: TC
Location: 27099 - 29387 (+)
Gene ID: HRGMv2_1821_12_22
Type: TC
Location: 29380 - 32847 (+)
Gene ID: HRGMv2_1821_12_23
Type: STP
Location: 32964 - 34970 (+)
Gene ID: HRGMv2_1821_12_24
Type: TC
Location: 35196 - 36485 (+)
Gene ID: HRGMv2_1821_12_25
Type: peptidase
Location: 36732 - 38222 (+)
Gene ID: HRGMv2_1821_12_26
Type: peptidase
Location: 38225 - 39097 (-)
Gene ID: HRGMv2_1821_12_27
Type: TC
Location: 39590 - 41347 (+)
Gene ID: HRGMv2_1821_12_28
Type: STP
Location: 41549 - 42583 (-)
Gene ID: HRGMv2_1821_12_29
Type: TC
Location: 42766 - 44826 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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