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Cluster: HRGMv2_1821_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1821_10 HRGMv2_1821_10_81 97239 97949 + 2.A.109.2.3
pfam HRGMv2_1821_10 HRGMv2_1821_10_82 98068 98286 + DUF903
TC HRGMv2_1821_10 HRGMv2_1821_10_83 98427 99467 + 8.A.5.1.5
pfam HRGMv2_1821_10 HRGMv2_1821_10_84 99508 99960 - Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_9
TF HRGMv2_1821_10 HRGMv2_1821_10_85 99957 100730 - GntR
TC HRGMv2_1821_10 HRGMv2_1821_10_86 100827 101144 - 4.A.3.2.6
CAZyme HRGMv2_1821_10 HRGMv2_1821_10_87 101160 102587 - GH1
TC HRGMv2_1821_10 HRGMv2_1821_10_88 102584 103933 - 4.A.3.2.9
TC HRGMv2_1821_10 HRGMv2_1821_10_89 104112 104420 + 4.A.3.2.9
pfam HRGMv2_1821_10 HRGMv2_1821_10_90 104453 105709 - Orn_DAP_Arg_deC | Orn_Arg_deC_N
TF HRGMv2_1821_10 HRGMv2_1821_10_91 105812 106732 + HTH_1
TC HRGMv2_1821_10 HRGMv2_1821_10_92 106729 107892 - 2.A.1.2.65
Gene ID: HRGMv2_1821_10_81
Type: TC
Location: 97239 - 97949 (+)
Gene ID: HRGMv2_1821_10_82
Type: pfam
Location: 98068 - 98286 (+)
Gene ID: HRGMv2_1821_10_83
Type: TC
Location: 98427 - 99467 (+)
Gene ID: HRGMv2_1821_10_84
Type: pfam
Location: 99508 - 99960 (-)
Gene ID: HRGMv2_1821_10_85
Type: TF
Location: 99957 - 100730 (-)
Gene ID: HRGMv2_1821_10_86
Type: TC
Location: 100827 - 101144 (-)
Gene ID: HRGMv2_1821_10_87
Type: CAZyme
Location: 101160 - 102587 (-)
Gene ID: HRGMv2_1821_10_88
Type: TC
Location: 102584 - 103933 (-)
Gene ID: HRGMv2_1821_10_89
Type: TC
Location: 104112 - 104420 (+)
Gene ID: HRGMv2_1821_10_90
Type: pfam
Location: 104453 - 105709 (-)
Gene ID: HRGMv2_1821_10_91
Type: TF
Location: 105812 - 106732 (+)
Gene ID: HRGMv2_1821_10_92
Type: TC
Location: 106729 - 107892 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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