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Cluster: HRGMv2_1821_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1821_3 HRGMv2_1821_3_119 131916 132887 - 3.A.1.2.1
TC HRGMv2_1821_3 HRGMv2_1821_3_120 132920 134422 - 3.A.1.2.21
TC HRGMv2_1821_3 HRGMv2_1821_3_121 134439 135479 - 3.A.1.2.6
pfam HRGMv2_1821_3 HRGMv2_1821_3_122 135535 136515 - AP_endonuc_2
pfam HRGMv2_1821_3 HRGMv2_1821_3_123 136824 139181 - PQQ | PQQ_2
CAZyme HRGMv2_1821_3 HRGMv2_1821_3_124 139849 140862 + GT101
pfam HRGMv2_1821_3 HRGMv2_1821_3_125 141053 142375 + Sugar_tr | OATP | MFS_1
TC HRGMv2_1821_3 HRGMv2_1821_3_126 142468 143898 - 2.A.39.1.5
TF HRGMv2_1821_3 HRGMv2_1821_3_127 144253 144708 - DUF24
TC HRGMv2_1821_3 HRGMv2_1821_3_128 144838 146049 + 2.A.1.36.2
TC HRGMv2_1821_3 HRGMv2_1821_3_129 146046 146930 + 2.A.7.3.2
Gene ID: HRGMv2_1821_3_119
Type: TC
Location: 131916 - 132887 (-)
Gene ID: HRGMv2_1821_3_120
Type: TC
Location: 132920 - 134422 (-)
Gene ID: HRGMv2_1821_3_121
Type: TC
Location: 134439 - 135479 (-)
Gene ID: HRGMv2_1821_3_122
Type: pfam
Location: 135535 - 136515 (-)
Gene ID: HRGMv2_1821_3_123
Type: pfam
Location: 136824 - 139181 (-)
Gene ID: HRGMv2_1821_3_124
Type: CAZyme
Location: 139849 - 140862 (+)
Gene ID: HRGMv2_1821_3_125
Type: pfam
Location: 141053 - 142375 (+)
Gene ID: HRGMv2_1821_3_126
Type: TC
Location: 142468 - 143898 (-)
Gene ID: HRGMv2_1821_3_127
Type: TF
Location: 144253 - 144708 (-)
Gene ID: HRGMv2_1821_3_128
Type: TC
Location: 144838 - 146049 (+)
Gene ID: HRGMv2_1821_3_129
Type: TC
Location: 146046 - 146930 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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