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Cluster: HRGMv2_1807_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1807_6 HRGMv2_1807_6_179 213507 215702 + GH77
CAZyme HRGMv2_1807_6 HRGMv2_1807_6_180 215720 218116 + CBM48 | GH13_9
CAZyme HRGMv2_1807_6 HRGMv2_1807_6_181 218141 219925 + GH13_11
NULL(UNKNOWN) HRGMv2_1807_6 HRGMv2_1807_6_182 219897 220277 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1807_6 HRGMv2_1807_6_183 220313 221077 - adh_short | KR | adh_short_C2
TC HRGMv2_1807_6 HRGMv2_1807_6_184 221098 222378 - 2.A.56.1.2
pfam HRGMv2_1807_6 HRGMv2_1807_6_185 222382 222885 - DctQ
TC HRGMv2_1807_6 HRGMv2_1807_6_186 222896 223876 - 2.A.56.1.9
Gene ID: HRGMv2_1807_6_179
Type: CAZyme
Location: 213507 - 215702 (+)
Gene ID: HRGMv2_1807_6_180
Type: CAZyme
Location: 215720 - 218116 (+)
Gene ID: HRGMv2_1807_6_181
Type: CAZyme
Location: 218141 - 219925 (+)
Gene ID: HRGMv2_1807_6_182
Type:
Location: 219897 - 220277 (+)
Gene ID: HRGMv2_1807_6_183
Type: pfam
Location: 220313 - 221077 (-)
Gene ID: HRGMv2_1807_6_184
Type: TC
Location: 221098 - 222378 (-)
Gene ID: HRGMv2_1807_6_185
Type: pfam
Location: 222382 - 222885 (-)
Gene ID: HRGMv2_1807_6_186
Type: TC
Location: 222896 - 223876 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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