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Cluster: HRGMv2_1807_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1807_6 HRGMv2_1807_6_98 110148 110897 - 3.A.1.3.12
NULL(UNKNOWN) HRGMv2_1807_6 HRGMv2_1807_6_99 111152 111703 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1807_6 HRGMv2_1807_6_100 111827 113491 - 3.A.1.120.6
pfam HRGMv2_1807_6 HRGMv2_1807_6_101 113723 114208 + SmpB
TC HRGMv2_1807_6 HRGMv2_1807_6_102 114246 115943 - 2.A.53.3.11
pfam HRGMv2_1807_6 HRGMv2_1807_6_103 117095 117364 + Ribosomal_S15
pfam HRGMv2_1807_6 HRGMv2_1807_6_104 117460 119739 + KH_1 | S1 | RNase_PH | RNase_PH | RNase_PH_C | RNase_PH_C | PNPase
TC HRGMv2_1807_6 HRGMv2_1807_6_105 119822 121195 + 2.A.22.5.3
TC HRGMv2_1807_6 HRGMv2_1807_6_106 121206 122576 + 2.A.22.5.3
TC HRGMv2_1807_6 HRGMv2_1807_6_107 122593 123966 + 2.A.22.5.3
CAZyme HRGMv2_1807_6 HRGMv2_1807_6_108 124198 126219 + GH23
Gene ID: HRGMv2_1807_6_98
Type: TC
Location: 110148 - 110897 (-)
Gene ID: HRGMv2_1807_6_99
Type:
Location: 111152 - 111703 (+)
Gene ID: HRGMv2_1807_6_100
Type: TC
Location: 111827 - 113491 (-)
Gene ID: HRGMv2_1807_6_101
Type: pfam
Location: 113723 - 114208 (+)
Gene ID: HRGMv2_1807_6_102
Type: TC
Location: 114246 - 115943 (-)
Gene ID: HRGMv2_1807_6_103
Type: pfam
Location: 117095 - 117364 (+)
Gene ID: HRGMv2_1807_6_104
Type: pfam
Location: 117460 - 119739 (+)
Gene ID: HRGMv2_1807_6_105
Type: TC
Location: 119822 - 121195 (+)
Gene ID: HRGMv2_1807_6_106
Type: TC
Location: 121206 - 122576 (+)
Gene ID: HRGMv2_1807_6_107
Type: TC
Location: 122593 - 123966 (+)
Gene ID: HRGMv2_1807_6_108
Type: CAZyme
Location: 124198 - 126219 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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