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Cluster: HRGMv2_1807_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1807_6 HRGMv2_1807_6_40 44106 45572 - GT5
pfam HRGMv2_1807_6 HRGMv2_1807_6_41 45758 46999 - NTP_transferase | Hexapep_GlmU
TC HRGMv2_1807_6 HRGMv2_1807_6_42 47588 48580 + 2.A.56.1.5
TC HRGMv2_1807_6 HRGMv2_1807_6_43 48672 49178 + 2.A.56.1.5
TC HRGMv2_1807_6 HRGMv2_1807_6_44 49190 50521 + 2.A.56.1.5
TC HRGMv2_1807_6 HRGMv2_1807_6_45 51146 52138 + 2.A.56.1.5
TC HRGMv2_1807_6 HRGMv2_1807_6_46 52230 52736 + 2.A.56.1.5
TC HRGMv2_1807_6 HRGMv2_1807_6_47 52748 54079 + 2.A.56.1.5
Gene ID: HRGMv2_1807_6_40
Type: CAZyme
Location: 44106 - 45572 (-)
Gene ID: HRGMv2_1807_6_41
Type: pfam
Location: 45758 - 46999 (-)
Gene ID: HRGMv2_1807_6_42
Type: TC
Location: 47588 - 48580 (+)
Gene ID: HRGMv2_1807_6_43
Type: TC
Location: 48672 - 49178 (+)
Gene ID: HRGMv2_1807_6_44
Type: TC
Location: 49190 - 50521 (+)
Gene ID: HRGMv2_1807_6_45
Type: TC
Location: 51146 - 52138 (+)
Gene ID: HRGMv2_1807_6_46
Type: TC
Location: 52230 - 52736 (+)
Gene ID: HRGMv2_1807_6_47
Type: TC
Location: 52748 - 54079 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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