Cluster: HRGMv2_1807_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1807
- CGC Family ID: CGCFAM_09857
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1807_15 | HRGMv2_1807_15_9 | 14059 | 15060 | - | GH23 |
| pfam | HRGMv2_1807_15 | HRGMv2_1807_15_10 | 15904 | 16467 | + | ZapC_N |
| pfam | HRGMv2_1807_15 | HRGMv2_1807_15_11 | 17493 | 18335 | + | Lipoprotein_9 |
| TC | HRGMv2_1807_15 | HRGMv2_1807_15_12 | 18352 | 19374 | + | 3.A.1.24.1 |
| TC | HRGMv2_1807_15 | HRGMv2_1807_15_13 | 19367 | 20038 | + | 3.A.1.24.5 |
Gene ID: HRGMv2_1807_15_9
Type: CAZyme
Location: 14059 - 15060 (-)
Type: CAZyme
Location: 14059 - 15060 (-)
Gene ID: HRGMv2_1807_15_10
Type: pfam
Location: 15904 - 16467 (+)
Type: pfam
Location: 15904 - 16467 (+)
Gene ID: HRGMv2_1807_15_11
Type: pfam
Location: 17493 - 18335 (+)
Type: pfam
Location: 17493 - 18335 (+)
Gene ID: HRGMv2_1807_15_12
Type: TC
Location: 18352 - 19374 (+)
Type: TC
Location: 18352 - 19374 (+)
Gene ID: HRGMv2_1807_15_13
Type: TC
Location: 19367 - 20038 (+)
Type: TC
Location: 19367 - 20038 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Succinivibrionaceae
Genus
Succinivibrio
Species
Succinivibrio sp019420905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.