dbCAN Logo

Cluster: HRGMv2_1807_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1807_13 HRGMv2_1807_13_136 160236 161258 + GH23
pfam HRGMv2_1807_13 HRGMv2_1807_13_137 161301 163391 - BRCT | DNA_ligase_aden | DNA_ligase_ZBD | DNA_ligase_OB | PTCB-BRCT | HHH_2 | HHH_5
pfam HRGMv2_1807_13 HRGMv2_1807_13_138 163394 164158 - ZipA_C
TC HRGMv2_1807_13 HRGMv2_1807_13_139 164262 165026 + 2.A.121.1.1
TC HRGMv2_1807_13 HRGMv2_1807_13_140 165030 166691 + 8.A.7.1.4
TC HRGMv2_1807_13 HRGMv2_1807_13_141 166744 167268 + 4.A.1.1.1
TC HRGMv2_1807_13 HRGMv2_1807_13_142 167400 168782 - 3.D.2.1.1
TC HRGMv2_1807_13 HRGMv2_1807_13_143 168803 170332 - 3.D.2.1.1
Gene ID: HRGMv2_1807_13_136
Type: CAZyme
Location: 160236 - 161258 (+)
Gene ID: HRGMv2_1807_13_137
Type: pfam
Location: 161301 - 163391 (-)
Gene ID: HRGMv2_1807_13_138
Type: pfam
Location: 163394 - 164158 (-)
Gene ID: HRGMv2_1807_13_139
Type: TC
Location: 164262 - 165026 (+)
Gene ID: HRGMv2_1807_13_140
Type: TC
Location: 165030 - 166691 (+)
Gene ID: HRGMv2_1807_13_141
Type: TC
Location: 166744 - 167268 (+)
Gene ID: HRGMv2_1807_13_142
Type: TC
Location: 167400 - 168782 (-)
Gene ID: HRGMv2_1807_13_143
Type: TC
Location: 168803 - 170332 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List