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Cluster: HRGMv2_1802_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1802_3 HRGMv2_1802_3_72 72478 74184 + GH13_18
TC HRGMv2_1802_3 HRGMv2_1802_3_73 74201 75493 + 3.A.1.1.46
TC HRGMv2_1802_3 HRGMv2_1802_3_74 75493 76395 + 3.A.1.1.46
TC HRGMv2_1802_3 HRGMv2_1802_3_75 76382 77224 + 3.A.1.1.46
pfam HRGMv2_1802_3 HRGMv2_1802_3_76 77252 78304 + ADH_zinc_N
pfam HRGMv2_1802_3 HRGMv2_1802_3_77 78321 79109 + AP_endonuc_2
CAZyme HRGMv2_1802_3 HRGMv2_1802_3_78 79120 80175 + GH179
CAZyme HRGMv2_1802_3 HRGMv2_1802_3_79 80172 82448 + GH65
pfam HRGMv2_1802_3 HRGMv2_1802_3_80 82445 83113 + Hydrolase | HAD_2
TC HRGMv2_1802_3 HRGMv2_1802_3_81 83124 84206 + 3.A.1.1.46
TC HRGMv2_1802_3 HRGMv2_1802_3_82 84275 85180 + 1.B.21.1.1
Gene ID: HRGMv2_1802_3_72
Type: CAZyme
Location: 72478 - 74184 (+)
Gene ID: HRGMv2_1802_3_73
Type: TC
Location: 74201 - 75493 (+)
Gene ID: HRGMv2_1802_3_74
Type: TC
Location: 75493 - 76395 (+)
Gene ID: HRGMv2_1802_3_75
Type: TC
Location: 76382 - 77224 (+)
Gene ID: HRGMv2_1802_3_76
Type: pfam
Location: 77252 - 78304 (+)
Gene ID: HRGMv2_1802_3_77
Type: pfam
Location: 78321 - 79109 (+)
Gene ID: HRGMv2_1802_3_78
Type: CAZyme
Location: 79120 - 80175 (+)
Gene ID: HRGMv2_1802_3_79
Type: CAZyme
Location: 80172 - 82448 (+)
Gene ID: HRGMv2_1802_3_80
Type: pfam
Location: 82445 - 83113 (+)
Gene ID: HRGMv2_1802_3_81
Type: TC
Location: 83124 - 84206 (+)
Gene ID: HRGMv2_1802_3_82
Type: TC
Location: 84275 - 85180 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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