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Cluster: HRGMv2_1802_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1802_50 HRGMv2_1802_50_11 12413 13213 + 3.A.1.13.1
TC HRGMv2_1802_50 HRGMv2_1802_50_12 13249 13872 + 1.A.62.2.2
pfam HRGMv2_1802_50 HRGMv2_1802_50_13 13916 14260 - Fe-S_biosyn
TC HRGMv2_1802_50 HRGMv2_1802_50_14 14342 15763 - 2.A.49.5.5
pfam HRGMv2_1802_50 HRGMv2_1802_50_15 15932 17212 + Aminotran_3
TC HRGMv2_1802_50 HRGMv2_1802_50_16 17249 19231 - 3.A.1.14.3
TC HRGMv2_1802_50 HRGMv2_1802_50_17 19228 20118 - 3.A.1.14.3
TC HRGMv2_1802_50 HRGMv2_1802_50_18 20118 20915 - 3.A.1.14.3
TC HRGMv2_1802_50 HRGMv2_1802_50_19 20962 23211 - 1.B.14.1.2
pfam HRGMv2_1802_50 HRGMv2_1802_50_20 23430 24446 - Fimbrial
TC HRGMv2_1802_50 HRGMv2_1802_50_21 24461 27019 - 1.B.11.3.6
pfam HRGMv2_1802_50 HRGMv2_1802_50_22 26976 27689 - PapD_N | PapD_C
pfam HRGMv2_1802_50 HRGMv2_1802_50_23 27741 28283 - Fimbrial
CAZyme HRGMv2_1802_50 HRGMv2_1802_50_24 28885 31422 - GT51
Gene ID: HRGMv2_1802_50_11
Type: TC
Location: 12413 - 13213 (+)
Gene ID: HRGMv2_1802_50_12
Type: TC
Location: 13249 - 13872 (+)
Gene ID: HRGMv2_1802_50_13
Type: pfam
Location: 13916 - 14260 (-)
Gene ID: HRGMv2_1802_50_14
Type: TC
Location: 14342 - 15763 (-)
Gene ID: HRGMv2_1802_50_15
Type: pfam
Location: 15932 - 17212 (+)
Gene ID: HRGMv2_1802_50_16
Type: TC
Location: 17249 - 19231 (-)
Gene ID: HRGMv2_1802_50_17
Type: TC
Location: 19228 - 20118 (-)
Gene ID: HRGMv2_1802_50_18
Type: TC
Location: 20118 - 20915 (-)
Gene ID: HRGMv2_1802_50_19
Type: TC
Location: 20962 - 23211 (-)
Gene ID: HRGMv2_1802_50_20
Type: pfam
Location: 23430 - 24446 (-)
Gene ID: HRGMv2_1802_50_21
Type: TC
Location: 24461 - 27019 (-)
Gene ID: HRGMv2_1802_50_22
Type: pfam
Location: 26976 - 27689 (-)
Gene ID: HRGMv2_1802_50_23
Type: pfam
Location: 27741 - 28283 (-)
Gene ID: HRGMv2_1802_50_24
Type: CAZyme
Location: 28885 - 31422 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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