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Cluster: HRGMv2_1802_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1802_42 HRGMv2_1802_42_17 16619 17092 + 4.A.6.1.4
TC HRGMv2_1802_42 HRGMv2_1802_42_18 17103 17882 + 4.A.6.1.4
TC HRGMv2_1802_42 HRGMv2_1802_42_19 17872 18750 + 4.A.6.1.4
TC HRGMv2_1802_42 HRGMv2_1802_42_20 18767 19201 + 4.A.6.1.6
CAZyme HRGMv2_1802_42 HRGMv2_1802_42_21 19198 20331 + CE9
STP HRGMv2_1802_42 HRGMv2_1802_42_22 20633 21787 + SIS | SIS
pfam HRGMv2_1802_42 HRGMv2_1802_42_23 21800 22672 + F_bP_aldolase
TC HRGMv2_1802_42 HRGMv2_1802_42_24 22795 24366 + 4.A.1.1.3
Gene ID: HRGMv2_1802_42_17
Type: TC
Location: 16619 - 17092 (+)
Gene ID: HRGMv2_1802_42_18
Type: TC
Location: 17103 - 17882 (+)
Gene ID: HRGMv2_1802_42_19
Type: TC
Location: 17872 - 18750 (+)
Gene ID: HRGMv2_1802_42_20
Type: TC
Location: 18767 - 19201 (+)
Gene ID: HRGMv2_1802_42_21
Type: CAZyme
Location: 19198 - 20331 (+)
Gene ID: HRGMv2_1802_42_22
Type: STP
Location: 20633 - 21787 (+)
Gene ID: HRGMv2_1802_42_23
Type: pfam
Location: 21800 - 22672 (+)
Gene ID: HRGMv2_1802_42_24
Type: TC
Location: 22795 - 24366 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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