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Cluster: HRGMv2_1802_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1802_38 HRGMv2_1802_38_10 12164 12487 + 9.B.32.1.2
TC HRGMv2_1802_38 HRGMv2_1802_38_11 12493 13629 + 8.A.1.1.4
TF HRGMv2_1802_38 HRGMv2_1802_38_12 13646 14599 - HTH_1
TC HRGMv2_1802_38 HRGMv2_1802_38_13 14721 15461 + 9.B.99.1.1
CAZyme HRGMv2_1802_38 HRGMv2_1802_38_14 15554 17509 - GH127
TC HRGMv2_1802_38 HRGMv2_1802_38_15 17520 18920 - 2.A.2.3.4
Gene ID: HRGMv2_1802_38_10
Type: TC
Location: 12164 - 12487 (+)
Gene ID: HRGMv2_1802_38_11
Type: TC
Location: 12493 - 13629 (+)
Gene ID: HRGMv2_1802_38_12
Type: TF
Location: 13646 - 14599 (-)
Gene ID: HRGMv2_1802_38_13
Type: TC
Location: 14721 - 15461 (+)
Gene ID: HRGMv2_1802_38_14
Type: CAZyme
Location: 15554 - 17509 (-)
Gene ID: HRGMv2_1802_38_15
Type: TC
Location: 17520 - 18920 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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