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Cluster: HRGMv2_1802_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1802_34 HRGMv2_1802_34_15 17774 18316 - 1.B.68.1.1
STP HRGMv2_1802_34 HRGMv2_1802_34_16 18630 19055 + NUDIX
STP HRGMv2_1802_34 HRGMv2_1802_34_17 19340 20479 + Aminotran_1_2
CAZyme HRGMv2_1802_34 HRGMv2_1802_34_18 20482 21465 + GT2
pfam HRGMv2_1802_34 HRGMv2_1802_34_19 21462 23444 + Formyl_trans_N | 3Beta_HSD | Epimerase | Formyl_trans_C | GDP_Man_Dehyd
pfam HRGMv2_1802_34 HRGMv2_1802_34_20 23441 24343 + Polysacc_deac_1
CAZyme HRGMv2_1802_34 HRGMv2_1802_34_21 24340 25998 + GT83
TC HRGMv2_1802_34 HRGMv2_1802_34_22 25995 26330 + 2.A.7.22.2
TC HRGMv2_1802_34 HRGMv2_1802_34_23 26330 26716 + 2.A.7.22.2
Gene ID: HRGMv2_1802_34_15
Type: TC
Location: 17774 - 18316 (-)
Gene ID: HRGMv2_1802_34_16
Type: STP
Location: 18630 - 19055 (+)
Gene ID: HRGMv2_1802_34_17
Type: STP
Location: 19340 - 20479 (+)
Gene ID: HRGMv2_1802_34_18
Type: CAZyme
Location: 20482 - 21465 (+)
Gene ID: HRGMv2_1802_34_19
Type: pfam
Location: 21462 - 23444 (+)
Gene ID: HRGMv2_1802_34_20
Type: pfam
Location: 23441 - 24343 (+)
Gene ID: HRGMv2_1802_34_21
Type: CAZyme
Location: 24340 - 25998 (+)
Gene ID: HRGMv2_1802_34_22
Type: TC
Location: 25995 - 26330 (+)
Gene ID: HRGMv2_1802_34_23
Type: TC
Location: 26330 - 26716 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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