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Cluster: HRGMv2_1802_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1802_25 HRGMv2_1802_25_35 31907 32227 + 4.A.3.2.1
TC HRGMv2_1802_25 HRGMv2_1802_25_36 32314 33672 + 4.A.3.2.1
TC HRGMv2_1802_25 HRGMv2_1802_25_37 33727 34074 + 4.A.3.2.1
TF HRGMv2_1802_25 HRGMv2_1802_25_38 34088 34927 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_1802_25 HRGMv2_1802_25_39 35052 36407 + GH4
Gene ID: HRGMv2_1802_25_35
Type: TC
Location: 31907 - 32227 (+)
Gene ID: HRGMv2_1802_25_36
Type: TC
Location: 32314 - 33672 (+)
Gene ID: HRGMv2_1802_25_37
Type: TC
Location: 33727 - 34074 (+)
Gene ID: HRGMv2_1802_25_38
Type: TF
Location: 34088 - 34927 (+)
Gene ID: HRGMv2_1802_25_39
Type: CAZyme
Location: 35052 - 36407 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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