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Cluster: HRGMv2_1802_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1802_13 HRGMv2_1802_13_57 59283 62087 + 1.B.12.1.3
pfam HRGMv2_1802_13 HRGMv2_1802_13_58 63140 65122 - TPR_19
TC HRGMv2_1802_13 HRGMv2_1802_13_59 65142 66446 - 8.A.4.2.2
TC HRGMv2_1802_13 HRGMv2_1802_13_60 66469 67164 - 3.A.1.101.2
TC HRGMv2_1802_13 HRGMv2_1802_13_61 67190 67984 - 3.A.1.101.2
TC HRGMv2_1802_13 HRGMv2_1802_13_62 67994 69079 - 1.B.18.2.1
CAZyme HRGMv2_1802_13 HRGMv2_1802_13_63 69125 70861 - GT4
Gene ID: HRGMv2_1802_13_57
Type: TC
Location: 59283 - 62087 (+)
Gene ID: HRGMv2_1802_13_58
Type: pfam
Location: 63140 - 65122 (-)
Gene ID: HRGMv2_1802_13_59
Type: TC
Location: 65142 - 66446 (-)
Gene ID: HRGMv2_1802_13_60
Type: TC
Location: 66469 - 67164 (-)
Gene ID: HRGMv2_1802_13_61
Type: TC
Location: 67190 - 67984 (-)
Gene ID: HRGMv2_1802_13_62
Type: TC
Location: 67994 - 69079 (-)
Gene ID: HRGMv2_1802_13_63
Type: CAZyme
Location: 69125 - 70861 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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