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Cluster: HRGMv2_1802_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1802_12 HRGMv2_1802_12_23 20746 21339 - 2.A.95.1.5
pfam HRGMv2_1802_12 HRGMv2_1802_12_24 21531 22637 + Semialdhyde_dh | Semialdhyde_dhC
CAZyme HRGMv2_1802_12 HRGMv2_1802_12_25 22910 25093 + CBM48 | GH13_9
CAZyme HRGMv2_1802_12 HRGMv2_1802_12_26 25093 27069 + CBM48 | GH13_11
pfam HRGMv2_1802_12 HRGMv2_1802_12_27 27083 28378 + NTP_transferase | NTP_transf_3 | Hexapep_GlmU
CAZyme HRGMv2_1802_12 HRGMv2_1802_12_28 28378 29811 + GT5
CAZyme HRGMv2_1802_12 HRGMv2_1802_12_29 29831 32278 + GT35
Gene ID: HRGMv2_1802_12_23
Type: TC
Location: 20746 - 21339 (-)
Gene ID: HRGMv2_1802_12_24
Type: pfam
Location: 21531 - 22637 (+)
Gene ID: HRGMv2_1802_12_25
Type: CAZyme
Location: 22910 - 25093 (+)
Gene ID: HRGMv2_1802_12_26
Type: CAZyme
Location: 25093 - 27069 (+)
Gene ID: HRGMv2_1802_12_27
Type: pfam
Location: 27083 - 28378 (+)
Gene ID: HRGMv2_1802_12_28
Type: CAZyme
Location: 28378 - 29811 (+)
Gene ID: HRGMv2_1802_12_29
Type: CAZyme
Location: 29831 - 32278 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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