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Cluster: HRGMv2_1794_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1794_5 HRGMv2_1794_5_87 99785 101155 + 2.A.3.1.3
TC HRGMv2_1794_5 HRGMv2_1794_5_88 101327 102733 + 2.A.2.3.4
CAZyme HRGMv2_1794_5 HRGMv2_1794_5_89 102733 103683 + GH43_26
TC HRGMv2_1794_5 HRGMv2_1794_5_90 103862 104716 - 9.B.125.1.1
pfam HRGMv2_1794_5 HRGMv2_1794_5_91 104713 105276 - Amidase_2
pfam HRGMv2_1794_5 HRGMv2_1794_5_92 105414 106307 + QRPTase_C | QRPTase_N
TC HRGMv2_1794_5 HRGMv2_1794_5_93 106488 106919 + 3.A.15.2.1
TC HRGMv2_1794_5 HRGMv2_1794_5_94 106930 108315 + 3.A.15.2.1
TC HRGMv2_1794_5 HRGMv2_1794_5_95 108305 109510 + 3.A.15.2.1
Gene ID: HRGMv2_1794_5_87
Type: TC
Location: 99785 - 101155 (+)
Gene ID: HRGMv2_1794_5_88
Type: TC
Location: 101327 - 102733 (+)
Gene ID: HRGMv2_1794_5_89
Type: CAZyme
Location: 102733 - 103683 (+)
Gene ID: HRGMv2_1794_5_90
Type: TC
Location: 103862 - 104716 (-)
Gene ID: HRGMv2_1794_5_91
Type: pfam
Location: 104713 - 105276 (-)
Gene ID: HRGMv2_1794_5_92
Type: pfam
Location: 105414 - 106307 (+)
Gene ID: HRGMv2_1794_5_93
Type: TC
Location: 106488 - 106919 (+)
Gene ID: HRGMv2_1794_5_94
Type: TC
Location: 106930 - 108315 (+)
Gene ID: HRGMv2_1794_5_95
Type: TC
Location: 108305 - 109510 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1794_5_88 vegetarian > omnivore 1.36359 0.04061
HRGMv2_1794_5_89 vegan > omnivore 2.62613 0.01786
HRGMv2_1794_5_89 vegetarian > omnivore 1.56390 0.04061

🧭 Explore Read Mapping of CGC

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