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Cluster: HRGMv2_1794_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1794_5 HRGMv2_1794_5_63 71810 73063 - CE4
pfam HRGMv2_1794_5 HRGMv2_1794_5_64 73120 73560 - EIIA-man
TC HRGMv2_1794_5 HRGMv2_1794_5_65 73684 74451 - 3.A.1.105.17
TC HRGMv2_1794_5 HRGMv2_1794_5_66 74451 75377 - 3.A.1.105.17
TC HRGMv2_1794_5 HRGMv2_1794_5_67 75608 76270 + 2.A.53.3.8
STP HRGMv2_1794_5 HRGMv2_1794_5_68 76328 76864 - Pribosyltran
pfam HRGMv2_1794_5 HRGMv2_1794_5_69 77067 79457 + PQQ | PQQ | PQQ | PQQ | PQQ | PQQ | PQQ_2 | PQQ_2
CAZyme HRGMv2_1794_5 HRGMv2_1794_5_70 79537 81132 - AA1
TC HRGMv2_1794_5 HRGMv2_1794_5_71 81299 81625 + 8.A.2.1.3
Gene ID: HRGMv2_1794_5_63
Type: CAZyme
Location: 71810 - 73063 (-)
Gene ID: HRGMv2_1794_5_64
Type: pfam
Location: 73120 - 73560 (-)
Gene ID: HRGMv2_1794_5_65
Type: TC
Location: 73684 - 74451 (-)
Gene ID: HRGMv2_1794_5_66
Type: TC
Location: 74451 - 75377 (-)
Gene ID: HRGMv2_1794_5_67
Type: TC
Location: 75608 - 76270 (+)
Gene ID: HRGMv2_1794_5_68
Type: STP
Location: 76328 - 76864 (-)
Gene ID: HRGMv2_1794_5_69
Type: pfam
Location: 77067 - 79457 (+)
Gene ID: HRGMv2_1794_5_70
Type: CAZyme
Location: 79537 - 81132 (-)
Gene ID: HRGMv2_1794_5_71
Type: TC
Location: 81299 - 81625 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1794_5_71 vegetarian > omnivore 2.12812 0.04061
HRGMv2_1794_5_71 vegetarian > vegan 1.15860 0.03242

🧭 Explore Read Mapping of CGC

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