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Cluster: HRGMv2_1794_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1794_5 HRGMv2_1794_5_43 48145 48945 + 3.A.1.13.1
TC HRGMv2_1794_5 HRGMv2_1794_5_44 48980 49606 + 1.A.62.2.2
pfam HRGMv2_1794_5 HRGMv2_1794_5_45 49685 50029 - Fe-S_biosyn
TC HRGMv2_1794_5 HRGMv2_1794_5_46 50111 51571 - 2.A.49.5.5
pfam HRGMv2_1794_5 HRGMv2_1794_5_47 51709 52989 + Aminotran_3
TC HRGMv2_1794_5 HRGMv2_1794_5_48 53125 55107 - 3.A.1.14.3
TC HRGMv2_1794_5 HRGMv2_1794_5_49 55104 55994 - 3.A.1.14.3
TC HRGMv2_1794_5 HRGMv2_1794_5_50 55994 56791 - 3.A.1.14.3
TC HRGMv2_1794_5 HRGMv2_1794_5_51 56837 59062 - 1.B.14.1.2
CAZyme HRGMv2_1794_5 HRGMv2_1794_5_52 59305 61857 - GT51
Gene ID: HRGMv2_1794_5_43
Type: TC
Location: 48145 - 48945 (+)
Gene ID: HRGMv2_1794_5_44
Type: TC
Location: 48980 - 49606 (+)
Gene ID: HRGMv2_1794_5_45
Type: pfam
Location: 49685 - 50029 (-)
Gene ID: HRGMv2_1794_5_46
Type: TC
Location: 50111 - 51571 (-)
Gene ID: HRGMv2_1794_5_47
Type: pfam
Location: 51709 - 52989 (+)
Gene ID: HRGMv2_1794_5_48
Type: TC
Location: 53125 - 55107 (-)
Gene ID: HRGMv2_1794_5_49
Type: TC
Location: 55104 - 55994 (-)
Gene ID: HRGMv2_1794_5_50
Type: TC
Location: 55994 - 56791 (-)
Gene ID: HRGMv2_1794_5_51
Type: TC
Location: 56837 - 59062 (-)
Gene ID: HRGMv2_1794_5_52
Type: CAZyme
Location: 59305 - 61857 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1794_5_46 vegetarian > vegan 1.43074 0.02592

🧭 Explore Read Mapping of CGC

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