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Cluster: HRGMv2_1794_CGC59

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1794_11 HRGMv2_1794_11_561 608320 608682 - 4.A.4.1.1
TC HRGMv2_1794_11 HRGMv2_1794_11_562 608696 609667 - 4.A.4.1.1
TC HRGMv2_1794_11 HRGMv2_1794_11_563 609664 610227 - 4.A.4.1.1
CAZyme HRGMv2_1794_11 HRGMv2_1794_11_564 610357 611583 + GH103
TC HRGMv2_1794_11 HRGMv2_1794_11_565 611923 612600 + 3.A.1.15.10
TC HRGMv2_1794_11 HRGMv2_1794_11_566 612597 613460 + 3.A.1.15.10
TC HRGMv2_1794_11 HRGMv2_1794_11_567 613468 614346 + 3.A.1.15.10
Gene ID: HRGMv2_1794_11_561
Type: TC
Location: 608320 - 608682 (-)
Gene ID: HRGMv2_1794_11_562
Type: TC
Location: 608696 - 609667 (-)
Gene ID: HRGMv2_1794_11_563
Type: TC
Location: 609664 - 610227 (-)
Gene ID: HRGMv2_1794_11_564
Type: CAZyme
Location: 610357 - 611583 (+)
Gene ID: HRGMv2_1794_11_565
Type: TC
Location: 611923 - 612600 (+)
Gene ID: HRGMv2_1794_11_566
Type: TC
Location: 612597 - 613460 (+)
Gene ID: HRGMv2_1794_11_567
Type: TC
Location: 613468 - 614346 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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