Cluster: HRGMv2_1794_CGC53
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_1794
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1794_11 | HRGMv2_1794_11_235 | 249306 | 250715 | + | 2.A.39.1.5 |
| TF | HRGMv2_1794_11 | HRGMv2_1794_11_236 | 250717 | 251571 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_1794_11 | HRGMv2_1794_11_237 | 251801 | 253639 | + | GH154 |
| TC | HRGMv2_1794_11 | HRGMv2_1794_11_238 | 253636 | 254916 | + | 2.A.1.5.4 |
| CAZyme | HRGMv2_1794_11 | HRGMv2_1794_11_239 | 254930 | 256120 | + | GH88 |
| peptidase | HRGMv2_1794_11 | HRGMv2_1794_11_240 | 256143 | 256700 | + | C56.UNW |
| TC | HRGMv2_1794_11 | HRGMv2_1794_11_241 | 256927 | 259101 | + | 1.B.14.1.3 |
| peptidase | HRGMv2_1794_11 | HRGMv2_1794_11_242 | 259156 | 260088 | - | S09.UNW |
| peptidase | HRGMv2_1794_11 | HRGMv2_1794_11_243 | 260172 | 261410 | - | S09.UNW |
| TC | HRGMv2_1794_11 | HRGMv2_1794_11_244 | 261514 | 265182 | - | 3.A.1.106.7 |
| CAZyme | HRGMv2_1794_11 | HRGMv2_1794_11_245 | 265229 | 266344 | - | GT1 |
| TF | HRGMv2_1794_11 | HRGMv2_1794_11_246 | 267092 | 267874 | + | GntR |
| pfam | HRGMv2_1794_11 | HRGMv2_1794_11_247 | 268009 | 268902 | + | DHDPS |
| TC | HRGMv2_1794_11 | HRGMv2_1794_11_248 | 269040 | 270530 | + | 2.A.1.12.1 |
Gene ID: HRGMv2_1794_11_235
Type: TC
Location: 249306 - 250715 (+)
Type: TC
Location: 249306 - 250715 (+)
Gene ID: HRGMv2_1794_11_236
Type: TF
Location: 250717 - 251571 (-)
Type: TF
Location: 250717 - 251571 (-)
Gene ID: HRGMv2_1794_11_237
Type: CAZyme
Location: 251801 - 253639 (+)
Type: CAZyme
Location: 251801 - 253639 (+)
Gene ID: HRGMv2_1794_11_238
Type: TC
Location: 253636 - 254916 (+)
Type: TC
Location: 253636 - 254916 (+)
Gene ID: HRGMv2_1794_11_239
Type: CAZyme
Location: 254930 - 256120 (+)
Type: CAZyme
Location: 254930 - 256120 (+)
Gene ID: HRGMv2_1794_11_240
Type: peptidase
Location: 256143 - 256700 (+)
Type: peptidase
Location: 256143 - 256700 (+)
Gene ID: HRGMv2_1794_11_241
Type: TC
Location: 256927 - 259101 (+)
Type: TC
Location: 256927 - 259101 (+)
Gene ID: HRGMv2_1794_11_242
Type: peptidase
Location: 259156 - 260088 (-)
Type: peptidase
Location: 259156 - 260088 (-)
Gene ID: HRGMv2_1794_11_243
Type: peptidase
Location: 260172 - 261410 (-)
Type: peptidase
Location: 260172 - 261410 (-)
Gene ID: HRGMv2_1794_11_244
Type: TC
Location: 261514 - 265182 (-)
Type: TC
Location: 261514 - 265182 (-)
Gene ID: HRGMv2_1794_11_245
Type: CAZyme
Location: 265229 - 266344 (-)
Type: CAZyme
Location: 265229 - 266344 (-)
Gene ID: HRGMv2_1794_11_246
Type: TF
Location: 267092 - 267874 (+)
Type: TF
Location: 267092 - 267874 (+)
Gene ID: HRGMv2_1794_11_247
Type: pfam
Location: 268009 - 268902 (+)
Type: pfam
Location: 268009 - 268902 (+)
Gene ID: HRGMv2_1794_11_248
Type: TC
Location: 269040 - 270530 (+)
Type: TC
Location: 269040 - 270530 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella aerogenes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.