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Cluster: HRGMv2_1794_CGC52

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1794_11 HRGMv2_1794_11_160 166774 168120 - 2.A.1.14.25
NULL(UNKNOWN) HRGMv2_1794_11 HRGMv2_1794_11_161 168157 170640 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1794_11 HRGMv2_1794_11_162 170673 171755 - GH105
TC HRGMv2_1794_11 HRGMv2_1794_11_163 172126 173466 - 1.B.19.1.1
TC HRGMv2_1794_11 HRGMv2_1794_11_164 173592 174989 - 2.A.1.82.4
TF HRGMv2_1794_11 HRGMv2_1794_11_165 175427 176458 + LacI
pfam HRGMv2_1794_11 HRGMv2_1794_11_166 176709 177638 + DHDPS
TC HRGMv2_1794_11 HRGMv2_1794_11_167 177824 179113 + 2.A.13.1.1
Gene ID: HRGMv2_1794_11_160
Type: TC
Location: 166774 - 168120 (-)
Gene ID: HRGMv2_1794_11_161
Type:
Location: 168157 - 170640 (-)
Gene ID: HRGMv2_1794_11_162
Type: CAZyme
Location: 170673 - 171755 (-)
Gene ID: HRGMv2_1794_11_163
Type: TC
Location: 172126 - 173466 (-)
Gene ID: HRGMv2_1794_11_164
Type: TC
Location: 173592 - 174989 (-)
Gene ID: HRGMv2_1794_11_165
Type: TF
Location: 175427 - 176458 (+)
Gene ID: HRGMv2_1794_11_166
Type: pfam
Location: 176709 - 177638 (+)
Gene ID: HRGMv2_1794_11_167
Type: TC
Location: 177824 - 179113 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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