Cluster: HRGMv2_1794_CGC45
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1794
- CGC Family ID: CGCFAM_03305
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1794_10 | HRGMv2_1794_10_27 | 29598 | 30230 | + | 2.A.53.3.8 |
| TC | HRGMv2_1794_10 | HRGMv2_1794_10_28 | 30227 | 31696 | + | 2.A.53.3.8 |
| pfam | HRGMv2_1794_10 | HRGMv2_1794_10_29 | 31810 | 32829 | + | ADH_zinc_N | AlaDh_PNT_C | ADH_N | ADH_zinc_N_2 |
| TC | HRGMv2_1794_10 | HRGMv2_1794_10_30 | 32972 | 33844 | + | 3.A.1.1.11 |
| TC | HRGMv2_1794_10 | HRGMv2_1794_10_31 | 33834 | 34721 | + | 3.A.1.1.18 |
| pfam | HRGMv2_1794_10 | HRGMv2_1794_10_32 | 34732 | 35556 | + | Metallophos | Metallophos_2 |
| TC | HRGMv2_1794_10 | HRGMv2_1794_10_33 | 35562 | 36635 | + | 3.A.1.1.3 |
| TC | HRGMv2_1794_10 | HRGMv2_1794_10_34 | 36628 | 37938 | + | 3.A.1.1.3 |
| TC | HRGMv2_1794_10 | HRGMv2_1794_10_35 | 38040 | 39536 | - | 2.A.1.1.26 |
| pfam | HRGMv2_1794_10 | HRGMv2_1794_10_36 | 39690 | 40589 | - | AP_endonuc_2 |
| pfam | HRGMv2_1794_10 | HRGMv2_1794_10_37 | 40613 | 41497 | - | AP_endonuc_2 |
| CAZyme | HRGMv2_1794_10 | HRGMv2_1794_10_38 | 41539 | 42552 | - | GH177 |
Gene ID: HRGMv2_1794_10_27
Type: TC
Location: 29598 - 30230 (+)
Type: TC
Location: 29598 - 30230 (+)
Gene ID: HRGMv2_1794_10_28
Type: TC
Location: 30227 - 31696 (+)
Type: TC
Location: 30227 - 31696 (+)
Gene ID: HRGMv2_1794_10_29
Type: pfam
Location: 31810 - 32829 (+)
Type: pfam
Location: 31810 - 32829 (+)
Gene ID: HRGMv2_1794_10_30
Type: TC
Location: 32972 - 33844 (+)
Type: TC
Location: 32972 - 33844 (+)
Gene ID: HRGMv2_1794_10_31
Type: TC
Location: 33834 - 34721 (+)
Type: TC
Location: 33834 - 34721 (+)
Gene ID: HRGMv2_1794_10_32
Type: pfam
Location: 34732 - 35556 (+)
Type: pfam
Location: 34732 - 35556 (+)
Gene ID: HRGMv2_1794_10_33
Type: TC
Location: 35562 - 36635 (+)
Type: TC
Location: 35562 - 36635 (+)
Gene ID: HRGMv2_1794_10_34
Type: TC
Location: 36628 - 37938 (+)
Type: TC
Location: 36628 - 37938 (+)
Gene ID: HRGMv2_1794_10_35
Type: TC
Location: 38040 - 39536 (-)
Type: TC
Location: 38040 - 39536 (-)
Gene ID: HRGMv2_1794_10_36
Type: pfam
Location: 39690 - 40589 (-)
Type: pfam
Location: 39690 - 40589 (-)
Gene ID: HRGMv2_1794_10_37
Type: pfam
Location: 40613 - 41497 (-)
Type: pfam
Location: 40613 - 41497 (-)
Gene ID: HRGMv2_1794_10_38
Type: CAZyme
Location: 41539 - 42552 (-)
Type: CAZyme
Location: 41539 - 42552 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella aerogenes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.