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Cluster: HRGMv2_1794_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1794_9 HRGMv2_1794_9_1505 1657037 1658725 - 9.B.33.1.1
TF HRGMv2_1794_9 HRGMv2_1794_9_1506 1658925 1659656 + MerR
NULL(UNKNOWN) HRGMv2_1794_9 HRGMv2_1794_9_1507 1659716 1659829 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1794_9 HRGMv2_1794_9_1508 1659804 1660541 - 3.A.1.12.15
TC HRGMv2_1794_9 HRGMv2_1794_9_1509 1660538 1661473 - 3.A.1.12.15
TC HRGMv2_1794_9 HRGMv2_1794_9_1510 1661466 1662623 - 3.A.1.12.15
TC HRGMv2_1794_9 HRGMv2_1794_9_1511 1662630 1663544 - 3.A.1.12.15
CAZyme HRGMv2_1794_9 HRGMv2_1794_9_1512 1663692 1665989 - GH3
Gene ID: HRGMv2_1794_9_1505
Type: TC
Location: 1657037 - 1658725 (-)
Gene ID: HRGMv2_1794_9_1506
Type: TF
Location: 1658925 - 1659656 (+)
Gene ID: HRGMv2_1794_9_1507
Type:
Location: 1659716 - 1659829 (+)
Gene ID: HRGMv2_1794_9_1508
Type: TC
Location: 1659804 - 1660541 (-)
Gene ID: HRGMv2_1794_9_1509
Type: TC
Location: 1660538 - 1661473 (-)
Gene ID: HRGMv2_1794_9_1510
Type: TC
Location: 1661466 - 1662623 (-)
Gene ID: HRGMv2_1794_9_1511
Type: TC
Location: 1662630 - 1663544 (-)
Gene ID: HRGMv2_1794_9_1512
Type: CAZyme
Location: 1663692 - 1665989 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1794_9_1507 vegetarian > vegan 5.57683 0.03242

🧭 Explore Read Mapping of CGC

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