Cluster: HRGMv2_1794_CGC42
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_1794
- CGC Family ID: CGCFAM_01020
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1794_9 | HRGMv2_1794_9_1449 | 1584587 | 1585972 | - | 9.B.18.1.1 |
| CAZyme | HRGMv2_1794_9 | HRGMv2_1794_9_1450 | 1586132 | 1587085 | - | GH39 |
| CAZyme | HRGMv2_1794_9 | HRGMv2_1794_9_1451 | 1587107 | 1588168 | - | GT4 |
| TC | HRGMv2_1794_9 | HRGMv2_1794_9_1452 | 1588165 | 1589622 | - | 2.A.66.2.6 |
| CAZyme | HRGMv2_1794_9 | HRGMv2_1794_9_1453 | 1589632 | 1590804 | - | GT4 |
| pfam | HRGMv2_1794_9 | HRGMv2_1794_9_1454 | 1590815 | 1591891 | - | PS_pyruv_trans |
| CAZyme | HRGMv2_1794_9 | HRGMv2_1794_9_1455 | 1591911 | 1593119 | - | GT4 |
| CAZyme | HRGMv2_1794_9 | HRGMv2_1794_9_1456 | 1593116 | 1594192 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_1794_9 | HRGMv2_1794_9_1457 | 1594217 | 1595494 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1794_9 | HRGMv2_1794_9_1458 | 1595569 | 1597737 | - | 8.A.3.3.1 |
| TC | HRGMv2_1794_9 | HRGMv2_1794_9_1459 | 1598188 | 1599327 | - | 1.B.18.3.8 |
| TC | HRGMv2_1794_9 | HRGMv2_1794_9_1460 | 1599467 | 1600900 | - | 1.B.73.1.1 |
| pfam | HRGMv2_1794_9 | HRGMv2_1794_9_1461 | 1601835 | 1602464 | - | PAP2 |
| pfam | HRGMv2_1794_9 | HRGMv2_1794_9_1462 | 1602912 | 1603802 | - | NTP_transferase |
| TC | HRGMv2_1794_9 | HRGMv2_1794_9_1463 | 1604657 | 1606243 | + | 2.A.109.2.3 |
| TC | HRGMv2_1794_9 | HRGMv2_1794_9_1464 | 1606293 | 1608140 | - | 9.B.22.2.1 |
Gene ID: HRGMv2_1794_9_1449
Type: TC
Location: 1584587 - 1585972 (-)
Type: TC
Location: 1584587 - 1585972 (-)
Gene ID: HRGMv2_1794_9_1450
Type: CAZyme
Location: 1586132 - 1587085 (-)
Type: CAZyme
Location: 1586132 - 1587085 (-)
Gene ID: HRGMv2_1794_9_1451
Type: CAZyme
Location: 1587107 - 1588168 (-)
Type: CAZyme
Location: 1587107 - 1588168 (-)
Gene ID: HRGMv2_1794_9_1452
Type: TC
Location: 1588165 - 1589622 (-)
Type: TC
Location: 1588165 - 1589622 (-)
Gene ID: HRGMv2_1794_9_1453
Type: CAZyme
Location: 1589632 - 1590804 (-)
Type: CAZyme
Location: 1589632 - 1590804 (-)
Gene ID: HRGMv2_1794_9_1454
Type: pfam
Location: 1590815 - 1591891 (-)
Type: pfam
Location: 1590815 - 1591891 (-)
Gene ID: HRGMv2_1794_9_1455
Type: CAZyme
Location: 1591911 - 1593119 (-)
Type: CAZyme
Location: 1591911 - 1593119 (-)
Gene ID: HRGMv2_1794_9_1456
Type: CAZyme
Location: 1593116 - 1594192 (-)
Type: CAZyme
Location: 1593116 - 1594192 (-)
Gene ID: HRGMv2_1794_9_1457
Type:
Location: 1594217 - 1595494 (-)
Type:
Location: 1594217 - 1595494 (-)
Gene ID: HRGMv2_1794_9_1458
Type: TC
Location: 1595569 - 1597737 (-)
Type: TC
Location: 1595569 - 1597737 (-)
Gene ID: HRGMv2_1794_9_1459
Type: TC
Location: 1598188 - 1599327 (-)
Type: TC
Location: 1598188 - 1599327 (-)
Gene ID: HRGMv2_1794_9_1460
Type: TC
Location: 1599467 - 1600900 (-)
Type: TC
Location: 1599467 - 1600900 (-)
Gene ID: HRGMv2_1794_9_1461
Type: pfam
Location: 1601835 - 1602464 (-)
Type: pfam
Location: 1601835 - 1602464 (-)
Gene ID: HRGMv2_1794_9_1462
Type: pfam
Location: 1602912 - 1603802 (-)
Type: pfam
Location: 1602912 - 1603802 (-)
Gene ID: HRGMv2_1794_9_1463
Type: TC
Location: 1604657 - 1606243 (+)
Type: TC
Location: 1604657 - 1606243 (+)
Gene ID: HRGMv2_1794_9_1464
Type: TC
Location: 1606293 - 1608140 (-)
Type: TC
Location: 1606293 - 1608140 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella aerogenes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.