dbCAN Logo

Cluster: HRGMv2_1794_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1794_2 HRGMv2_1794_2_143 155739 157772 - 2.A.15.1.4
STP HRGMv2_1794_2 HRGMv2_1794_2_144 157901 158494 + TetR_N
sulfatase HRGMv2_1794_2 HRGMv2_1794_2_145 158506 159978 + S1_6
CAZyme HRGMv2_1794_2 HRGMv2_1794_2_146 159993 161657 + AA3_2
pfam HRGMv2_1794_2 HRGMv2_1794_2_147 161940 163055 + GCS2
pfam HRGMv2_1794_2 HRGMv2_1794_2_148 163104 163832 + NAGPA
TC HRGMv2_1794_2 HRGMv2_1794_2_149 163877 166600 - 3.A.3.2.41
Gene ID: HRGMv2_1794_2_143
Type: TC
Location: 155739 - 157772 (-)
Gene ID: HRGMv2_1794_2_144
Type: STP
Location: 157901 - 158494 (+)
Gene ID: HRGMv2_1794_2_145
Type: sulfatase
Location: 158506 - 159978 (+)
Gene ID: HRGMv2_1794_2_146
Type: CAZyme
Location: 159993 - 161657 (+)
Gene ID: HRGMv2_1794_2_147
Type: pfam
Location: 161940 - 163055 (+)
Gene ID: HRGMv2_1794_2_148
Type: pfam
Location: 163104 - 163832 (+)
Gene ID: HRGMv2_1794_2_149
Type: TC
Location: 163877 - 166600 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List