dbCAN HGM

Cluster: HRGMv2_1794_CGC34

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_1794_9	HRGMv2_1794_9_1146	1210805	1212136	-	2.A.42.2.2
STP	HRGMv2_1794_9	HRGMv2_1794_9_1147	1212158	1213147	-	PALP
TF	HRGMv2_1794_9	HRGMv2_1794_9_1148	1213242	1214180	-	HTH_1
TC	HRGMv2_1794_9	HRGMv2_1794_9_1149	1214773	1215909	-	2.A.1.2.42
TF	HRGMv2_1794_9	HRGMv2_1794_9_1150	1216001	1216771	+	HTH_AraC \| HTH_AraC
CAZyme	HRGMv2_1794_9	HRGMv2_1794_9_1151	1216895	1218628	+	GH37
TC	HRGMv2_1794_9	HRGMv2_1794_9_1152	1218738	1220972	+	1.B.14.1.17
CAZyme	HRGMv2_1794_9	HRGMv2_1794_9_1153	1221019	1221693	-	GH23
peptidase	HRGMv2_1794_9	HRGMv2_1794_9_1154	1221726	1222640	+	S66.002
TC	HRGMv2_1794_9	HRGMv2_1794_9_1155	1222731	1224464	+	2.A.36.6.11

Gene ID: HRGMv2_1794_9_1146
Type: TC
Location: 1210805 - 1212136 (-)

Gene ID: HRGMv2_1794_9_1147
Type: STP
Location: 1212158 - 1213147 (-)

Gene ID: HRGMv2_1794_9_1148
Type: TF
Location: 1213242 - 1214180 (-)

Gene ID: HRGMv2_1794_9_1149
Type: TC
Location: 1214773 - 1215909 (-)

Gene ID: HRGMv2_1794_9_1150
Type: TF
Location: 1216001 - 1216771 (+)

Gene ID: HRGMv2_1794_9_1151
Type: CAZyme
Location: 1216895 - 1218628 (+)

Gene ID: HRGMv2_1794_9_1152
Type: TC
Location: 1218738 - 1220972 (+)

Gene ID: HRGMv2_1794_9_1153
Type: CAZyme
Location: 1221019 - 1221693 (-)

Gene ID: HRGMv2_1794_9_1154
Type: peptidase
Location: 1221726 - 1222640 (+)

Gene ID: HRGMv2_1794_9_1155
Type: TC
Location: 1222731 - 1224464 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.