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Cluster: HRGMv2_1794_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1794_9 HRGMv2_1794_9_899 950895 952349 + 2.A.2.3.2
CAZyme HRGMv2_1794_9 HRGMv2_1794_9_900 952393 954072 + CBM91 | GH43_11
pfam HRGMv2_1794_9 HRGMv2_1794_9_901 954198 955064 - Aldo_ket_red
TC HRGMv2_1794_9 HRGMv2_1794_9_902 955493 956599 - 4.A.2.1.22
TC HRGMv2_1794_9 HRGMv2_1794_9_903 956643 956954 - 4.A.2.1.22
TC HRGMv2_1794_9 HRGMv2_1794_9_904 957000 957464 - 4.A.2.1.9
pfam HRGMv2_1794_9 HRGMv2_1794_9_905 957732 958409 - Ribul_P_3_epim
TC HRGMv2_1794_9 HRGMv2_1794_9_906 958431 959693 - 4.A.7.1.4
TC HRGMv2_1794_9 HRGMv2_1794_9_907 959725 959991 - 4.A.7.1.2
TC HRGMv2_1794_9 HRGMv2_1794_9_908 960002 960442 - 4.A.7.1.2
TF HRGMv2_1794_9 HRGMv2_1794_9_909 960665 961717 + LacI
TC HRGMv2_1794_9 HRGMv2_1794_9_910 961897 963513 - 3.A.1.5.1
Gene ID: HRGMv2_1794_9_899
Type: TC
Location: 950895 - 952349 (+)
Gene ID: HRGMv2_1794_9_900
Type: CAZyme
Location: 952393 - 954072 (+)
Gene ID: HRGMv2_1794_9_901
Type: pfam
Location: 954198 - 955064 (-)
Gene ID: HRGMv2_1794_9_902
Type: TC
Location: 955493 - 956599 (-)
Gene ID: HRGMv2_1794_9_903
Type: TC
Location: 956643 - 956954 (-)
Gene ID: HRGMv2_1794_9_904
Type: TC
Location: 957000 - 957464 (-)
Gene ID: HRGMv2_1794_9_905
Type: pfam
Location: 957732 - 958409 (-)
Gene ID: HRGMv2_1794_9_906
Type: TC
Location: 958431 - 959693 (-)
Gene ID: HRGMv2_1794_9_907
Type: TC
Location: 959725 - 959991 (-)
Gene ID: HRGMv2_1794_9_908
Type: TC
Location: 960002 - 960442 (-)
Gene ID: HRGMv2_1794_9_909
Type: TF
Location: 960665 - 961717 (+)
Gene ID: HRGMv2_1794_9_910
Type: TC
Location: 961897 - 963513 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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