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Cluster: HRGMv2_1794_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1794_9 HRGMv2_1794_9_589 621699 622631 - CE4
pfam HRGMv2_1794_9 HRGMv2_1794_9_590 622647 623387 - Asp_Glu_race
TF HRGMv2_1794_9 HRGMv2_1794_9_591 623387 624103 - GntR
TC HRGMv2_1794_9 HRGMv2_1794_9_592 624247 625743 + 2.A.39.3.4
peptidase HRGMv2_1794_9 HRGMv2_1794_9_593 625838 627151 + M38.UNW
TC HRGMv2_1794_9 HRGMv2_1794_9_594 627195 627521 - 9.B.35.1.2
pfam HRGMv2_1794_9 HRGMv2_1794_9_595 627518 628018 - OHCU_decarbox
TC HRGMv2_1794_9 HRGMv2_1794_9_596 627996 629378 - 2.A.40.4.2
Gene ID: HRGMv2_1794_9_589
Type: CAZyme
Location: 621699 - 622631 (-)
Gene ID: HRGMv2_1794_9_590
Type: pfam
Location: 622647 - 623387 (-)
Gene ID: HRGMv2_1794_9_591
Type: TF
Location: 623387 - 624103 (-)
Gene ID: HRGMv2_1794_9_592
Type: TC
Location: 624247 - 625743 (+)
Gene ID: HRGMv2_1794_9_593
Type: peptidase
Location: 625838 - 627151 (+)
Gene ID: HRGMv2_1794_9_594
Type: TC
Location: 627195 - 627521 (-)
Gene ID: HRGMv2_1794_9_595
Type: pfam
Location: 627518 - 628018 (-)
Gene ID: HRGMv2_1794_9_596
Type: TC
Location: 627996 - 629378 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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