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Cluster: HRGMv2_1794_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1794_9 HRGMv2_1794_9_351 376789 378294 - 2.A.17.1.2
NULL(UNKNOWN) HRGMv2_1794_9 HRGMv2_1794_9_352 378601 378702 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_1794_9 HRGMv2_1794_9_353 378951 379586 - HhH-GPD
TC HRGMv2_1794_9 HRGMv2_1794_9_354 379588 380286 - 3.D.6.1.4
TC HRGMv2_1794_9 HRGMv2_1794_9_355 380290 380910 - 3.D.6.1.4
TC HRGMv2_1794_9 HRGMv2_1794_9_356 380920 381972 - 3.D.6.1.4
TC HRGMv2_1794_9 HRGMv2_1794_9_357 381973 384195 - 3.D.6.1.4
TC HRGMv2_1794_9 HRGMv2_1794_9_358 384188 384766 - 3.D.6.1.4
TC HRGMv2_1794_9 HRGMv2_1794_9_359 384766 385347 - 3.D.6.1.4
pfam HRGMv2_1794_9 HRGMv2_1794_9_360 385426 385866 - DUF2569
TF HRGMv2_1794_9 HRGMv2_1794_9_361 385945 386160 - HHA
CAZyme HRGMv2_1794_9 HRGMv2_1794_9_362 386375 387745 - GH1
Gene ID: HRGMv2_1794_9_351
Type: TC
Location: 376789 - 378294 (-)
Gene ID: HRGMv2_1794_9_352
Type:
Location: 378601 - 378702 (+)
Gene ID: HRGMv2_1794_9_353
Type: STP
Location: 378951 - 379586 (-)
Gene ID: HRGMv2_1794_9_354
Type: TC
Location: 379588 - 380286 (-)
Gene ID: HRGMv2_1794_9_355
Type: TC
Location: 380290 - 380910 (-)
Gene ID: HRGMv2_1794_9_356
Type: TC
Location: 380920 - 381972 (-)
Gene ID: HRGMv2_1794_9_357
Type: TC
Location: 381973 - 384195 (-)
Gene ID: HRGMv2_1794_9_358
Type: TC
Location: 384188 - 384766 (-)
Gene ID: HRGMv2_1794_9_359
Type: TC
Location: 384766 - 385347 (-)
Gene ID: HRGMv2_1794_9_360
Type: pfam
Location: 385426 - 385866 (-)
Gene ID: HRGMv2_1794_9_361
Type: TF
Location: 385945 - 386160 (-)
Gene ID: HRGMv2_1794_9_362
Type: CAZyme
Location: 386375 - 387745 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1794_9_359 vegetarian > vegan 1.29460 0.03242

🧭 Explore Read Mapping of CGC

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