Cluster: HRGMv2_1794_CGC21
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_1794
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1794_7 | HRGMv2_1794_7_340 | 372142 | 373482 | + | 2.A.8.1.8 |
| pfam | HRGMv2_1794_7 | HRGMv2_1794_7_341 | 373956 | 375062 | + | Semialdhyde_dh | Semialdhyde_dhC |
| CAZyme | HRGMv2_1794_7 | HRGMv2_1794_7_342 | 375300 | 377483 | + | CBM48 | GH13_9 |
| CAZyme | HRGMv2_1794_7 | HRGMv2_1794_7_343 | 377483 | 379459 | + | CBM48 | GH13_11 |
| pfam | HRGMv2_1794_7 | HRGMv2_1794_7_344 | 379528 | 380823 | + | NTP_transferase | NTP_transf_3 | Hexapep_GlmU |
| CAZyme | HRGMv2_1794_7 | HRGMv2_1794_7_345 | 380823 | 382256 | + | GT5 |
| CAZyme | HRGMv2_1794_7 | HRGMv2_1794_7_346 | 382274 | 384721 | + | GT35 |
| pfam | HRGMv2_1794_7 | HRGMv2_1794_7_347 | 384818 | 386326 | - | DAO | DAO_C |
| STP | HRGMv2_1794_7 | HRGMv2_1794_7_348 | 386533 | 386862 | + | Rhodanese |
| TC | HRGMv2_1794_7 | HRGMv2_1794_7_349 | 386915 | 387745 | + | 9.B.104.1.1 |
| TF | HRGMv2_1794_7 | HRGMv2_1794_7_350 | 387765 | 388523 | + | HTH_DeoR |
| TF | HRGMv2_1794_7 | HRGMv2_1794_7_351 | 388530 | 391235 | - | GerE |
| CAZyme | HRGMv2_1794_7 | HRGMv2_1794_7_352 | 391857 | 394247 | + | GT35 |
| CAZyme | HRGMv2_1794_7 | HRGMv2_1794_7_353 | 394258 | 396333 | + | GH77 |
| TC | HRGMv2_1794_7 | HRGMv2_1794_7_354 | 396587 | 397903 | - | 2.A.8.1.4 |
Gene ID: HRGMv2_1794_7_340
Type: TC
Location: 372142 - 373482 (+)
Type: TC
Location: 372142 - 373482 (+)
Gene ID: HRGMv2_1794_7_341
Type: pfam
Location: 373956 - 375062 (+)
Type: pfam
Location: 373956 - 375062 (+)
Gene ID: HRGMv2_1794_7_342
Type: CAZyme
Location: 375300 - 377483 (+)
Type: CAZyme
Location: 375300 - 377483 (+)
Gene ID: HRGMv2_1794_7_343
Type: CAZyme
Location: 377483 - 379459 (+)
Type: CAZyme
Location: 377483 - 379459 (+)
Gene ID: HRGMv2_1794_7_344
Type: pfam
Location: 379528 - 380823 (+)
Type: pfam
Location: 379528 - 380823 (+)
Gene ID: HRGMv2_1794_7_345
Type: CAZyme
Location: 380823 - 382256 (+)
Type: CAZyme
Location: 380823 - 382256 (+)
Gene ID: HRGMv2_1794_7_346
Type: CAZyme
Location: 382274 - 384721 (+)
Type: CAZyme
Location: 382274 - 384721 (+)
Gene ID: HRGMv2_1794_7_347
Type: pfam
Location: 384818 - 386326 (-)
Type: pfam
Location: 384818 - 386326 (-)
Gene ID: HRGMv2_1794_7_348
Type: STP
Location: 386533 - 386862 (+)
Type: STP
Location: 386533 - 386862 (+)
Gene ID: HRGMv2_1794_7_349
Type: TC
Location: 386915 - 387745 (+)
Type: TC
Location: 386915 - 387745 (+)
Gene ID: HRGMv2_1794_7_350
Type: TF
Location: 387765 - 388523 (+)
Type: TF
Location: 387765 - 388523 (+)
Gene ID: HRGMv2_1794_7_351
Type: TF
Location: 388530 - 391235 (-)
Type: TF
Location: 388530 - 391235 (-)
Gene ID: HRGMv2_1794_7_352
Type: CAZyme
Location: 391857 - 394247 (+)
Type: CAZyme
Location: 391857 - 394247 (+)
Gene ID: HRGMv2_1794_7_353
Type: CAZyme
Location: 394258 - 396333 (+)
Type: CAZyme
Location: 394258 - 396333 (+)
Gene ID: HRGMv2_1794_7_354
Type: TC
Location: 396587 - 397903 (-)
Type: TC
Location: 396587 - 397903 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella aerogenes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1794_7_348 | vegetarian > omnivore | 2.03028 | 0.04061 |
| HRGMv2_1794_7_348 | vegetarian > vegan | 1.60542 | 0.02675 |