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Cluster: HRGMv2_1794_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1794_7 HRGMv2_1794_7_282 318551 319534 + GT2
pfam HRGMv2_1794_7 HRGMv2_1794_7_283 319531 321516 + Formyl_trans_N | 3Beta_HSD | Epimerase | Formyl_trans_C | GDP_Man_Dehyd
pfam HRGMv2_1794_7 HRGMv2_1794_7_284 321513 322415 + Polysacc_deac_1
CAZyme HRGMv2_1794_7 HRGMv2_1794_7_285 322412 324067 + GT83
TC HRGMv2_1794_7 HRGMv2_1794_7_286 324064 324402 + 2.A.7.22.2
TC HRGMv2_1794_7 HRGMv2_1794_7_287 324402 324785 + 2.A.7.22.1
Gene ID: HRGMv2_1794_7_282
Type: CAZyme
Location: 318551 - 319534 (+)
Gene ID: HRGMv2_1794_7_283
Type: pfam
Location: 319531 - 321516 (+)
Gene ID: HRGMv2_1794_7_284
Type: pfam
Location: 321513 - 322415 (+)
Gene ID: HRGMv2_1794_7_285
Type: CAZyme
Location: 322412 - 324067 (+)
Gene ID: HRGMv2_1794_7_286
Type: TC
Location: 324064 - 324402 (+)
Gene ID: HRGMv2_1794_7_287
Type: TC
Location: 324402 - 324785 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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