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Cluster: HRGMv2_1794_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1794_7 HRGMv2_1794_7_240 263436 266054 + GT2
TC HRGMv2_1794_7 HRGMv2_1794_7_241 266107 268413 + 4.D.3.1.6
CAZyme HRGMv2_1794_7 HRGMv2_1794_7_242 268420 269526 + GH8
TC HRGMv2_1794_7 HRGMv2_1794_7_243 269508 272993 + 1.B.55.3.1
STP HRGMv2_1794_7 HRGMv2_1794_7_244 273190 275196 + EAL | GGDEF
TC HRGMv2_1794_7 HRGMv2_1794_7_245 275352 276638 + 2.A.23.1.7
peptidase HRGMv2_1794_7 HRGMv2_1794_7_246 276848 278347 + M16.UNW
STP HRGMv2_1794_7 HRGMv2_1794_7_247 278550 279479 - PfkB
TC HRGMv2_1794_7 HRGMv2_1794_7_248 279674 281725 + 9.B.121.1.1
TC HRGMv2_1794_7 HRGMv2_1794_7_249 281775 283097 - 2.A.1.6.10
TC HRGMv2_1794_7 HRGMv2_1794_7_250 283369 284400 - 9.B.126.1.1
Gene ID: HRGMv2_1794_7_240
Type: CAZyme
Location: 263436 - 266054 (+)
Gene ID: HRGMv2_1794_7_241
Type: TC
Location: 266107 - 268413 (+)
Gene ID: HRGMv2_1794_7_242
Type: CAZyme
Location: 268420 - 269526 (+)
Gene ID: HRGMv2_1794_7_243
Type: TC
Location: 269508 - 272993 (+)
Gene ID: HRGMv2_1794_7_244
Type: STP
Location: 273190 - 275196 (+)
Gene ID: HRGMv2_1794_7_245
Type: TC
Location: 275352 - 276638 (+)
Gene ID: HRGMv2_1794_7_246
Type: peptidase
Location: 276848 - 278347 (+)
Gene ID: HRGMv2_1794_7_247
Type: STP
Location: 278550 - 279479 (-)
Gene ID: HRGMv2_1794_7_248
Type: TC
Location: 279674 - 281725 (+)
Gene ID: HRGMv2_1794_7_249
Type: TC
Location: 281775 - 283097 (-)
Gene ID: HRGMv2_1794_7_250
Type: TC
Location: 283369 - 284400 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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