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Cluster: HRGMv2_1794_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1794_7 HRGMv2_1794_7_197 213743 214231 + 3.D.1.9.2
STP HRGMv2_1794_7 HRGMv2_1794_7_198 214268 215524 - Aminotran_1_2
CAZyme HRGMv2_1794_7 HRGMv2_1794_7_199 215697 217727 - GH13_19
CAZyme HRGMv2_1794_7 HRGMv2_1794_7_200 218307 218870 + GH73
TF HRGMv2_1794_7 HRGMv2_1794_7_201 218914 220092 - HTH_AraC | HTH_AraC
TC HRGMv2_1794_7 HRGMv2_1794_7_202 220216 221397 - 3.A.1.2.4
TC HRGMv2_1794_7 HRGMv2_1794_7_203 221375 222916 - 3.A.1.2.4
TC HRGMv2_1794_7 HRGMv2_1794_7_204 222981 223976 - 3.A.1.2.4
NULL(UNKNOWN) HRGMv2_1794_7 HRGMv2_1794_7_205 224349 225671 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1794_7 HRGMv2_1794_7_206 225767 227221 + FGGY_N | FGGY_C
TC HRGMv2_1794_7 HRGMv2_1794_7_207 227391 227768 + 9.B.44.1.1
TC HRGMv2_1794_7 HRGMv2_1794_7_208 227874 228869 - 9.B.97.1.1
Gene ID: HRGMv2_1794_7_197
Type: TC
Location: 213743 - 214231 (+)
Gene ID: HRGMv2_1794_7_198
Type: STP
Location: 214268 - 215524 (-)
Gene ID: HRGMv2_1794_7_199
Type: CAZyme
Location: 215697 - 217727 (-)
Gene ID: HRGMv2_1794_7_200
Type: CAZyme
Location: 218307 - 218870 (+)
Gene ID: HRGMv2_1794_7_201
Type: TF
Location: 218914 - 220092 (-)
Gene ID: HRGMv2_1794_7_202
Type: TC
Location: 220216 - 221397 (-)
Gene ID: HRGMv2_1794_7_203
Type: TC
Location: 221375 - 222916 (-)
Gene ID: HRGMv2_1794_7_204
Type: TC
Location: 222981 - 223976 (-)
Gene ID: HRGMv2_1794_7_205
Type:
Location: 224349 - 225671 (+)
Gene ID: HRGMv2_1794_7_206
Type: pfam
Location: 225767 - 227221 (+)
Gene ID: HRGMv2_1794_7_207
Type: TC
Location: 227391 - 227768 (+)
Gene ID: HRGMv2_1794_7_208
Type: TC
Location: 227874 - 228869 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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