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Cluster: HRGMv2_1794_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1794_7 HRGMv2_1794_7_17 19353 19733 + 1.A.77.3.8
TC HRGMv2_1794_7 HRGMv2_1794_7_18 19742 20557 + 3.A.2.1.1
TC HRGMv2_1794_7 HRGMv2_1794_7_19 20606 20845 + 3.A.2.1.1
TC HRGMv2_1794_7 HRGMv2_1794_7_20 20900 21370 + 3.A.2.1.1
TC HRGMv2_1794_7 HRGMv2_1794_7_21 21385 21918 + 3.A.2.1.1
TC HRGMv2_1794_7 HRGMv2_1794_7_22 21931 23472 + 3.A.2.1.1
TC HRGMv2_1794_7 HRGMv2_1794_7_23 23523 24386 + 3.A.2.1.1
TC HRGMv2_1794_7 HRGMv2_1794_7_24 24413 25795 + 3.A.2.1.1
TC HRGMv2_1794_7 HRGMv2_1794_7_25 25816 26235 + 3.A.2.1.1
pfam HRGMv2_1794_7 HRGMv2_1794_7_26 26939 28309 + Hexapep | Hexapep | NTP_transferase | IspD | NTP_transf_3 | Hexapep_2
STP HRGMv2_1794_7 HRGMv2_1794_7_27 28495 30324 + SIS | SIS
TC HRGMv2_1794_7 HRGMv2_1794_7_28 30736 31776 + 3.A.1.7.1
TC HRGMv2_1794_7 HRGMv2_1794_7_29 31902 32861 + 3.A.1.7.1
TC HRGMv2_1794_7 HRGMv2_1794_7_30 32861 33751 + 3.A.1.7.1
TC HRGMv2_1794_7 HRGMv2_1794_7_31 33798 34571 + 3.A.1.7.1
pfam HRGMv2_1794_7 HRGMv2_1794_7_32 34621 35346 + PhoU | PhoU
TC HRGMv2_1794_7 HRGMv2_1794_7_33 35823 37457 + 1.B.3.1.3
CAZyme HRGMv2_1794_7 HRGMv2_1794_7_34 37500 38666 + CE1
pfam HRGMv2_1794_7 HRGMv2_1794_7_35 38716 39435 + Glucosamine_iso
pfam HRGMv2_1794_7 HRGMv2_1794_7_36 39505 40170 - Hydrolase | HAD_2
TC HRGMv2_1794_7 HRGMv2_1794_7_37 40341 41678 + 2.A.40.7.6
Gene ID: HRGMv2_1794_7_17
Type: TC
Location: 19353 - 19733 (+)
Gene ID: HRGMv2_1794_7_18
Type: TC
Location: 19742 - 20557 (+)
Gene ID: HRGMv2_1794_7_19
Type: TC
Location: 20606 - 20845 (+)
Gene ID: HRGMv2_1794_7_20
Type: TC
Location: 20900 - 21370 (+)
Gene ID: HRGMv2_1794_7_21
Type: TC
Location: 21385 - 21918 (+)
Gene ID: HRGMv2_1794_7_22
Type: TC
Location: 21931 - 23472 (+)
Gene ID: HRGMv2_1794_7_23
Type: TC
Location: 23523 - 24386 (+)
Gene ID: HRGMv2_1794_7_24
Type: TC
Location: 24413 - 25795 (+)
Gene ID: HRGMv2_1794_7_25
Type: TC
Location: 25816 - 26235 (+)
Gene ID: HRGMv2_1794_7_26
Type: pfam
Location: 26939 - 28309 (+)
Gene ID: HRGMv2_1794_7_27
Type: STP
Location: 28495 - 30324 (+)
Gene ID: HRGMv2_1794_7_28
Type: TC
Location: 30736 - 31776 (+)
Gene ID: HRGMv2_1794_7_29
Type: TC
Location: 31902 - 32861 (+)
Gene ID: HRGMv2_1794_7_30
Type: TC
Location: 32861 - 33751 (+)
Gene ID: HRGMv2_1794_7_31
Type: TC
Location: 33798 - 34571 (+)
Gene ID: HRGMv2_1794_7_32
Type: pfam
Location: 34621 - 35346 (+)
Gene ID: HRGMv2_1794_7_33
Type: TC
Location: 35823 - 37457 (+)
Gene ID: HRGMv2_1794_7_34
Type: CAZyme
Location: 37500 - 38666 (+)
Gene ID: HRGMv2_1794_7_35
Type: pfam
Location: 38716 - 39435 (+)
Gene ID: HRGMv2_1794_7_36
Type: pfam
Location: 39505 - 40170 (-)
Gene ID: HRGMv2_1794_7_37
Type: TC
Location: 40341 - 41678 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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