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Cluster: HRGMv2_1794_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1794_1 HRGMv2_1794_1_50 53157 54443 - 2.A.40.1.1
STP HRGMv2_1794_1 HRGMv2_1794_1_51 54540 55166 - Pribosyltran
CAZyme HRGMv2_1794_1 HRGMv2_1794_1_52 55363 56793 - GH1
pfam HRGMv2_1794_1 HRGMv2_1794_1_53 57043 58080 + AIRS | AIRS_C
pfam HRGMv2_1794_1 HRGMv2_1794_1_54 58077 58718 + Formyl_trans_N
CAZyme HRGMv2_1794_1 HRGMv2_1794_1_55 58772 60112 - GH28
TC HRGMv2_1794_1 HRGMv2_1794_1_56 60474 61985 + 2.A.2.5.1
CAZyme HRGMv2_1794_1 HRGMv2_1794_1_57 61960 63057 + GH105
Gene ID: HRGMv2_1794_1_50
Type: TC
Location: 53157 - 54443 (-)
Gene ID: HRGMv2_1794_1_51
Type: STP
Location: 54540 - 55166 (-)
Gene ID: HRGMv2_1794_1_52
Type: CAZyme
Location: 55363 - 56793 (-)
Gene ID: HRGMv2_1794_1_53
Type: pfam
Location: 57043 - 58080 (+)
Gene ID: HRGMv2_1794_1_54
Type: pfam
Location: 58077 - 58718 (+)
Gene ID: HRGMv2_1794_1_55
Type: CAZyme
Location: 58772 - 60112 (-)
Gene ID: HRGMv2_1794_1_56
Type: TC
Location: 60474 - 61985 (+)
Gene ID: HRGMv2_1794_1_57
Type: CAZyme
Location: 61960 - 63057 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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