dbCAN Logo

Cluster: HRGMv2_1784_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1784_4 HRGMv2_1784_4_203 236404 238263 + 4.A.1.2.2
CAZyme HRGMv2_1784_4 HRGMv2_1784_4_204 238279 239673 + GH1
pfam HRGMv2_1784_4 HRGMv2_1784_4_205 239797 240531 - Ubie_methyltran | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
TC HRGMv2_1784_4 HRGMv2_1784_4_206 240655 242100 + 1.B.17.3.10
TC HRGMv2_1784_4 HRGMv2_1784_4_207 242164 242733 - 9.B.27.2.7
TC HRGMv2_1784_4 HRGMv2_1784_4_208 243138 243725 + 9.B.29.3.1
Gene ID: HRGMv2_1784_4_203
Type: TC
Location: 236404 - 238263 (+)
Gene ID: HRGMv2_1784_4_204
Type: CAZyme
Location: 238279 - 239673 (+)
Gene ID: HRGMv2_1784_4_205
Type: pfam
Location: 239797 - 240531 (-)
Gene ID: HRGMv2_1784_4_206
Type: TC
Location: 240655 - 242100 (+)
Gene ID: HRGMv2_1784_4_207
Type: TC
Location: 242164 - 242733 (-)
Gene ID: HRGMv2_1784_4_208
Type: TC
Location: 243138 - 243725 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List