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Cluster: HRGMv2_1784_CGC70

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1784_24 HRGMv2_1784_24_124 138120 138482 - 4.A.4.1.1
TC HRGMv2_1784_24 HRGMv2_1784_24_125 138496 139473 - 4.A.4.1.1
TC HRGMv2_1784_24 HRGMv2_1784_24_126 139470 140033 - 4.A.4.1.1
CAZyme HRGMv2_1784_24 HRGMv2_1784_24_127 140333 141406 + GH103
TC HRGMv2_1784_24 HRGMv2_1784_24_128 141641 142318 + 3.A.1.15.10
TC HRGMv2_1784_24 HRGMv2_1784_24_129 142315 143178 + 3.A.1.15.10
TC HRGMv2_1784_24 HRGMv2_1784_24_130 143188 144066 + 3.A.1.15.10
Gene ID: HRGMv2_1784_24_124
Type: TC
Location: 138120 - 138482 (-)
Gene ID: HRGMv2_1784_24_125
Type: TC
Location: 138496 - 139473 (-)
Gene ID: HRGMv2_1784_24_126
Type: TC
Location: 139470 - 140033 (-)
Gene ID: HRGMv2_1784_24_127
Type: CAZyme
Location: 140333 - 141406 (+)
Gene ID: HRGMv2_1784_24_128
Type: TC
Location: 141641 - 142318 (+)
Gene ID: HRGMv2_1784_24_129
Type: TC
Location: 142315 - 143178 (+)
Gene ID: HRGMv2_1784_24_130
Type: TC
Location: 143188 - 144066 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1784_24_126 vegetarian > vegan 1.55959 0.02152

🧭 Explore Read Mapping of CGC

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