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Cluster: HRGMv2_1784_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1784_2 HRGMv2_1784_2_334 377785 379056 + 1.B.3.1.1
TC HRGMv2_1784_2 HRGMv2_1784_2_335 379196 379510 - 4.A.1.1.1
CAZyme HRGMv2_1784_2 HRGMv2_1784_2_336 379580 381637 - GH42
CAZyme HRGMv2_1784_2 HRGMv2_1784_2_337 381669 382871 - GH53
TC HRGMv2_1784_2 HRGMv2_1784_2_338 382876 383727 - 3.A.1.1.2
TC HRGMv2_1784_2 HRGMv2_1784_2_339 383738 385045 - 3.A.1.1.2
TC HRGMv2_1784_2 HRGMv2_1784_2_340 385166 386398 - 3.A.1.1.2
TC HRGMv2_1784_2 HRGMv2_1784_2_341 386753 387862 + 3.A.1.1.4
STP HRGMv2_1784_2 HRGMv2_1784_2_342 388124 389707 + EAL
pfam HRGMv2_1784_2 HRGMv2_1784_2_343 389723 390268 + Flavin_Reduct
TC HRGMv2_1784_2 HRGMv2_1784_2_344 390316 390669 - 3.A.5.1.1
TC HRGMv2_1784_2 HRGMv2_1784_2_345 390762 391376 - 2.A.115.2.6
Gene ID: HRGMv2_1784_2_334
Type: TC
Location: 377785 - 379056 (+)
Gene ID: HRGMv2_1784_2_335
Type: TC
Location: 379196 - 379510 (-)
Gene ID: HRGMv2_1784_2_336
Type: CAZyme
Location: 379580 - 381637 (-)
Gene ID: HRGMv2_1784_2_337
Type: CAZyme
Location: 381669 - 382871 (-)
Gene ID: HRGMv2_1784_2_338
Type: TC
Location: 382876 - 383727 (-)
Gene ID: HRGMv2_1784_2_339
Type: TC
Location: 383738 - 385045 (-)
Gene ID: HRGMv2_1784_2_340
Type: TC
Location: 385166 - 386398 (-)
Gene ID: HRGMv2_1784_2_341
Type: TC
Location: 386753 - 387862 (+)
Gene ID: HRGMv2_1784_2_342
Type: STP
Location: 388124 - 389707 (+)
Gene ID: HRGMv2_1784_2_343
Type: pfam
Location: 389723 - 390268 (+)
Gene ID: HRGMv2_1784_2_344
Type: TC
Location: 390316 - 390669 (-)
Gene ID: HRGMv2_1784_2_345
Type: TC
Location: 390762 - 391376 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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