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Cluster: HRGMv2_1784_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1784_17 HRGMv2_1784_17_294 320647 323265 + GT2
TC HRGMv2_1784_17 HRGMv2_1784_17_295 323276 325639 + 4.D.3.1.6
CAZyme HRGMv2_1784_17 HRGMv2_1784_17_296 325643 326752 + GH8
TC HRGMv2_1784_17 HRGMv2_1784_17_297 326734 330213 + 1.B.55.3.1
STP HRGMv2_1784_17 HRGMv2_1784_17_298 330522 332531 + EAL | GGDEF
TC HRGMv2_1784_17 HRGMv2_1784_17_299 332689 333975 + 2.A.23.1.7
peptidase HRGMv2_1784_17 HRGMv2_1784_17_300 334196 335689 + M16.UNW
STP HRGMv2_1784_17 HRGMv2_1784_17_301 335742 336755 - PfkB
TC HRGMv2_1784_17 HRGMv2_1784_17_302 336866 338917 + 9.B.121.1.1
TC HRGMv2_1784_17 HRGMv2_1784_17_303 338965 340287 - 2.A.1.6.10
TC HRGMv2_1784_17 HRGMv2_1784_17_304 340558 341589 - 9.B.126.1.1
Gene ID: HRGMv2_1784_17_294
Type: CAZyme
Location: 320647 - 323265 (+)
Gene ID: HRGMv2_1784_17_295
Type: TC
Location: 323276 - 325639 (+)
Gene ID: HRGMv2_1784_17_296
Type: CAZyme
Location: 325643 - 326752 (+)
Gene ID: HRGMv2_1784_17_297
Type: TC
Location: 326734 - 330213 (+)
Gene ID: HRGMv2_1784_17_298
Type: STP
Location: 330522 - 332531 (+)
Gene ID: HRGMv2_1784_17_299
Type: TC
Location: 332689 - 333975 (+)
Gene ID: HRGMv2_1784_17_300
Type: peptidase
Location: 334196 - 335689 (+)
Gene ID: HRGMv2_1784_17_301
Type: STP
Location: 335742 - 336755 (-)
Gene ID: HRGMv2_1784_17_302
Type: TC
Location: 336866 - 338917 (+)
Gene ID: HRGMv2_1784_17_303
Type: TC
Location: 338965 - 340287 (-)
Gene ID: HRGMv2_1784_17_304
Type: TC
Location: 340558 - 341589 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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