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Cluster: HRGMv2_1784_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1784_17 HRGMv2_1784_17_273 292635 293837 + 2.A.1.11.3
pfam HRGMv2_1784_17 HRGMv2_1784_17_274 294201 295892 + Sulfatase | EptA_B_N
TC HRGMv2_1784_17 HRGMv2_1784_17_275 297164 298771 + 3.A.1.5.27
TC HRGMv2_1784_17 HRGMv2_1784_17_276 298878 299897 + 3.A.1.5.39
TC HRGMv2_1784_17 HRGMv2_1784_17_277 299907 300809 + 3.A.1.5.39
TC HRGMv2_1784_17 HRGMv2_1784_17_278 300820 301803 + 3.A.1.5.27
TC HRGMv2_1784_17 HRGMv2_1784_17_279 301800 302813 + 3.A.1.5.27
pfam HRGMv2_1784_17 HRGMv2_1784_17_280 303310 303942 + CBP_BcsO
STP HRGMv2_1784_17 HRGMv2_1784_17_281 303933 304736 + CbiA
CAZyme HRGMv2_1784_17 HRGMv2_1784_17_282 304756 306867 + GT2
TC HRGMv2_1784_17 HRGMv2_1784_17_283 306864 309347 + 4.D.3.1.6
TC HRGMv2_1784_17 HRGMv2_1784_17_284 309344 313396 + 1.B.55.3.1
pfam HRGMv2_1784_17 HRGMv2_1784_17_285 313399 313872 + Cellsynth_D
CAZyme HRGMv2_1784_17 HRGMv2_1784_17_286 313884 314876 + GH8
Gene ID: HRGMv2_1784_17_273
Type: TC
Location: 292635 - 293837 (+)
Gene ID: HRGMv2_1784_17_274
Type: pfam
Location: 294201 - 295892 (+)
Gene ID: HRGMv2_1784_17_275
Type: TC
Location: 297164 - 298771 (+)
Gene ID: HRGMv2_1784_17_276
Type: TC
Location: 298878 - 299897 (+)
Gene ID: HRGMv2_1784_17_277
Type: TC
Location: 299907 - 300809 (+)
Gene ID: HRGMv2_1784_17_278
Type: TC
Location: 300820 - 301803 (+)
Gene ID: HRGMv2_1784_17_279
Type: TC
Location: 301800 - 302813 (+)
Gene ID: HRGMv2_1784_17_280
Type: pfam
Location: 303310 - 303942 (+)
Gene ID: HRGMv2_1784_17_281
Type: STP
Location: 303933 - 304736 (+)
Gene ID: HRGMv2_1784_17_282
Type: CAZyme
Location: 304756 - 306867 (+)
Gene ID: HRGMv2_1784_17_283
Type: TC
Location: 306864 - 309347 (+)
Gene ID: HRGMv2_1784_17_284
Type: TC
Location: 309344 - 313396 (+)
Gene ID: HRGMv2_1784_17_285
Type: pfam
Location: 313399 - 313872 (+)
Gene ID: HRGMv2_1784_17_286
Type: CAZyme
Location: 313884 - 314876 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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